RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SH3D19Q5HYK7 790 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 APPBP2Q92624 585 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 ERO1AQ96HE7 468 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 LNPKQ9C0E8 428 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 SIPA1L1O43166 1804 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 FOCADQ5VW36 1801 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 USP17L21D6R901 530 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 SMIM22K7EJ46 135 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 GADL1Q6ZQY3 521 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 CHD1LQ86WJ1 897 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 CD99L2Q8TCZ2 262 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
PDLIM5-216ENST00000511767 MYH1P12882 1939 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 GSG1L2A8MUP6 293 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 GH2P01242 217 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 CYP2C8P10632 490 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 BACE1P56817 501 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 OTOP1Q7RTM1 612 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 CPA4Q9UI42 421 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 TRIM17Q9Y577 477 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
PDLIM5-216ENST00000511767 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 TREML2Q5T2D2 321 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 CTR9Q6PD62 1173 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 PROCA1Q8NCQ7 364 aaPredicted RBP19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 DYNLL2Q96FJ2 89 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 SEC62Q99442 399 aaKnown RBP19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 EFCC1Q9HA90 598 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 TAOK2Q9UL54 1235 aa19.4■□□□□ 0.7
PDLIM5-216ENST00000511767 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.7
PDLIM5-216ENST00000511767 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 M0R2C6 588 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 BCRP11274 1271 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 HMGCS2P54868 508 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 ZMYM1Q5SVZ6 1142 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 FBXO46Q6PJ61 603 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 EVI5LQ96CN4 794 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
PDLIM5-216ENST00000511767 USP17L10C9JJH3 530 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 GPAA1O43292 621 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 PARK7Q99497 189 aaKnown RBP19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 FSD1Q9BTV5 496 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 OSBPL3Q9H4L5 887 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 PTPN22Q9Y2R2 807 aa19.38■□□□□ 0.69
PDLIM5-216ENST00000511767 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 CDK8P49336 464 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 ARHGEF6Q15052 776 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 SLC44A5Q8NCS7 719 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 DDRGK1Q96HY6 314 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
PDLIM5-216ENST00000511767 CTGFP29279 349 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 HOXA7P31268 230 aaPredicted RBP19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 MTMR2Q13614 643 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 SEPT2Q15019 361 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 TICAM2Q86XR7 235 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 ACER1Q8TDN7 264 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 ARHGAP39Q9C0H5 1083 aa19.36■□□□□ 0.69
PDLIM5-216ENST00000511767 GNAT2P19087 354 aa19.35■□□□□ 0.69
PDLIM5-216ENST00000511767 RAB3GAP1Q15042 981 aa19.35■□□□□ 0.69
PDLIM5-216ENST00000511767 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
PDLIM5-216ENST00000511767 MYH7P12883 1935 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 OSBPP22059 807 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 PSMC4P43686 418 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 KIF22Q14807 665 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 C16orf86Q6ZW13 317 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 CCDC17Q96LX7 622 aa19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 P2RX7Q99572 595 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 ASCC2Q9H1I8 757 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-216ENST00000511767 GNRH1P01148 92 aa19.33■□□□□ 0.68
PDLIM5-216ENST00000511767 AMOTL1Q8IY63 956 aa19.33■□□□□ 0.68
PDLIM5-216ENST00000511767 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.68
PDLIM5-216ENST00000511767 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
PDLIM5-216ENST00000511767 PTPRFP10586 1907 aa19.33■□□□□ 0.68
PDLIM5-216ENST00000511767 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 APPP05067 770 aa19.32■□□□□ 0.68
PDLIM5-216ENST00000511767 AKR1B1P15121 316 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms