RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 FGRP09769 529 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 MCM5P33992 734 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 TDO2P48775 406 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 RCAN1P53805 252 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 AK2P54819 239 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 GTF2IP78347 998 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
NR1I3-228ENST00000511676 KIF22Q14807 665 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 MAP3K11Q16584 847 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 ANKRD13AQ8IZ07 590 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 MIGA1Q8NAN2 632 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 TMEM106CQ9BVX2 250 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 DEFB129Q9H1M3 183 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 KCNQ5Q9NR82 932 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 PSME4Q14997 1843 aa10.74□□□□□ -0.69
NR1I3-228ENST00000511676 ZNF646O15015 1829 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 AKNAD1Q5T1N1 836 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 STOX1Q6ZVD7 989 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 MB21D2Q8IYB1 491 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 ZNF296Q8WUU4 475 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 ZNF287Q9HBT7 754 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
NR1I3-228ENST00000511676 ANGEL1Q9UNK9 670 aaKnown RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
NR1I3-228ENST00000511676 SHTN1A0MZ66 631 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 ORC4O43929 436 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 EGFRP00533 1210 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 RBM5P52756 815 aaKnown RBP eCLIP10.72□□□□□ -0.69
NR1I3-228ENST00000511676 PPARAQ07869 468 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 NBPF9Q3BBW0 867 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 SPRYD7Q5W111 196 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 TEKT1Q969V4 418 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 ZNF274Q96GC6 653 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-228ENST00000511676 ZDHHC15Q96MV8 337 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 DCP1AQ9NPI6 582 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-228ENST00000511676 TMOD2Q9NZR1 351 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
NR1I3-228ENST00000511676 LAMB1P07942 1786 aa10.72□□□□□ -0.69
NR1I3-228ENST00000511676 TBC1D8O95759 1140 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 POLR2AP24928 1970 aaKnown RBP10.71□□□□□ -0.69
NR1I3-228ENST00000511676 LIFRP42702 1097 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 BTDP43251 543 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 PRMT2P55345 433 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 RHBDL3P58872 404 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 NUCB2P80303 420 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 TOB2Q14106 344 aaPredicted RBP10.71□□□□□ -0.69
NR1I3-228ENST00000511676 NID2Q14112 1375 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
NR1I3-228ENST00000511676 CCDC178Q5BJE1 867 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 KIAA0825Q8IV33 1275 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 CERS5Q8N5B7 392 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 ZCCHC17Q9NP64 241 aaKnown RBP10.71□□□□□ -0.69
NR1I3-228ENST00000511676 AATFQ9NY61 560 aaKnown RBP eCLIP10.71□□□□□ -0.69
NR1I3-228ENST00000511676 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 CSADQ9Y600 493 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 TAF6LQ9Y6J9 622 aa10.71□□□□□ -0.69
NR1I3-228ENST00000511676 PRC1O43663 620 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 PRKAB2O43741 272 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 HOXD10P28358 340 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 GTF2A2P52657 109 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 DYNLL1P63167 89 aaKnown RBP10.7□□□□□ -0.7
NR1I3-228ENST00000511676 PDE4BQ07343 736 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 CTR9Q6PD62 1173 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 SGMS1Q86VZ5 419 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 IFNL1Q8IU54 200 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 ESR2Q92731 530 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 ZIC5Q96T25 663 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 LLPHQ9BRT6 129 aaKnown RBP10.7□□□□□ -0.7
NR1I3-228ENST00000511676 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
NR1I3-228ENST00000511676 TTF2Q9UNY4 1162 aaKnown RBP10.7□□□□□ -0.7
NR1I3-228ENST00000511676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
NR1I3-228ENST00000511676 MYH2Q9UKX2 1941 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
NR1I3-228ENST00000511676 USP5P45974 858 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 SOX10P56693 466 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 HAND2P61296 217 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 FGD1P98174 961 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 SP3Q02447 781 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 GRIK5Q16478 980 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 TEX11Q8IYF3 940 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 SDR42E1Q8WUS8 393 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 IDI2Q9BXS1 227 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms