RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 A6NHS1 94 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 GOLGA8KD6RF30 607 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ATP6V1G2O95670 118 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ADKP55263 362 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 UBASH3AP57075 661 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 AKAP17AQ02040 695 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 CUL3Q13618 768 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 C6orf89Q6UWU4 347 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 CCDC121Q6ZUS5 278 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 FSIP1Q8NA03 581 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ZNF473Q8WTR7 871 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 CUL5Q93034 780 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ZNF570Q96NI8 536 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ZCWPW1Q9H0M4 648 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 EPN3Q9H201 632 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 POLD4Q9HCU8 107 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 INTS13Q9NVM9 706 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 PREX2Q70Z35 1606 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 CHL1O00533 1208 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 CBFA2T2O43439 604 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 MYO1BO43795 1136 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 KIF5CO60282 957 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 SMIM24O75264 130 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 SURF6O75683 361 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 ANP32DO95626 131 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 NBPF7P0C2Y1 421 aaPredicted RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 NDUFA8P51970 172 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 FAM160A1Q05DH4 1040 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 XRCC4Q13426 336 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
CPNE4-208ENST00000511604 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 PHACTR1Q9C0D0 580 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 LZTFL1Q9NQ48 299 aa8.23□□□□□ -1.09
CPNE4-208ENST00000511604 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CTAGE9A4FU28 777 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 GOLGA6L10A6NI86 522 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 DNM1LO00429 736 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 SLC27A2O14975 620 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CCDC175P0C221 793 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 ATP4AP20648 1035 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 LSP1P33241 339 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CFAP100Q494V2 611 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CRELD2Q6UXH1 353 aaPredicted RBP8.22□□□□□ -1.09
CPNE4-208ENST00000511604 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 SELENOOQ9BVL4 669 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 FANCLQ9NW38 375 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CFAP45Q9UL16 551 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 MROH2AA6NES4 1674 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 M0R2C6 588 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 SERPINC1P01008 464 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
CPNE4-208ENST00000511604 USP14P54578 494 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 OTUD7BQ6GQQ9 843 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 Q6ZUG5 572 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 PPP1R42Q7Z4L9 355 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 USP44Q9H0E7 712 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 ZFATQ9P243 1243 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 BAIAP2L1Q9UHR4 511 aa8.22□□□□□ -1.09
CPNE4-208ENST00000511604 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.09
CPNE4-208ENST00000511604 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.09
CPNE4-208ENST00000511604 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.09
CPNE4-208ENST00000511604 LMTK2Q8IWU2 1503 aa8.21□□□□□ -1.09
CPNE4-208ENST00000511604 PDLIM1O00151 329 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 HDLBPQ00341 1268 aaKnown RBP8.21□□□□□ -1.1
CPNE4-208ENST00000511604 TMEM62Q0P6H9 643 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 MTX1Q13505 466 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 MYBPC3Q14896 1274 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 SPRED3Q2MJR0 410 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 ANKRD20A8PQ5CZ79 823 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 SPECC1Q5M775 1068 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 ZNF569Q5MCW4 686 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
CPNE4-208ENST00000511604 MIPOL1Q8TD10 442 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 OSBPL7Q9BZF2 842 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 TRIM7Q9C029 511 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 PCDHA7Q9UN72 937 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 NEO1Q92859 1461 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 DEPDC5O75140 1603 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 IKBKBO14920 756 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 CYP27B1O15528 508 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 ZMYND10O75800 440 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 ZNF24P17028 368 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 CCDC15Q0P6D6 951 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 MPP3Q13368 585 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 GSPT2Q8IYD1 628 aaKnown RBP8.21□□□□□ -1.1
CPNE4-208ENST00000511604 TC2NQ8N9U0 490 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 MYCBPAPQ8TBZ2 947 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 C17orf50Q8WW18 174 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 DTNBP1Q96EV8 351 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 CCT8L2Q96SF2 557 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 SDF4Q9BRK5 362 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 SLC5A4Q9NY91 659 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
CPNE4-208ENST00000511604 RCOR1Q9UKL0 485 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms