RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	NLGN1	Q8N2Q7	840 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	TDRD7	Q8NHU6	1098 aa	Known RBP	10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	PGBD1	Q96JS3	809 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	USP28	Q96RU2	1077 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	CRAMP1	Q96RY5	1269 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	NOL10	Q9BSC4	688 aa	Known RBP	10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	RBM28	Q9NW13	759 aa	Known RBP	10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	DACT1	Q9NYF0	836 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	CCDC39	Q9UFE4	941 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	COL6A3	P12111	3177 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	ADAMTSL1	Q8N6G6	1762 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	ESPN	B1AK53	854 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	KIN	O60870	393 aa	Known RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	DTNB	O60941	627 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	DDAH1	O94760	285 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	DEXI	O95424	95 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	ITGBL1	O95965	494 aa	Predicted RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	LDHB	P07195	334 aa	Known RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	COL11A2	P13942	1736 aa	Predicted RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	HOXA10	P31260	410 aa	Predicted RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	FAM160A1	Q05DH4	1040 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	GNL2	Q13823	731 aa	Known RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	STK38	Q15208	465 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	SAFB	Q15424	915 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	CCDC178	Q5BJE1	867 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	ADAL	Q6DHV7	355 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	SLF2	Q8IX21	1173 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	ZNF654	Q8IZM8	581 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	FAM200A	Q8TCP9	573 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	SDR42E1	Q8WUS8	393 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	MRPS27	Q92552	414 aa	Known RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	RNF26	Q9BY78	433 aa	Predicted RBP	10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	PODXL2	Q9NZ53	605 aa		10.88	□□□□□ -0.67
IFT122-223	ENST00000511498	TNKS	O95271	1327 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	KLRG2	A4D1S0	409 aa	Predicted RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	MINDY4B	A8MYZ0	360 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	BAG3	O95817	575 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	XBP1	P17861	261 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	KLRK1	P26718	216 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	CDC27	P30260	824 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	CLCN1	P35523	988 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	ME1	P48163	572 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	FOSB	P53539	338 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	DYNLL1	P63167	89 aa	Known RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	GUCY1B3	Q02153	619 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	PDE4B	Q07343	736 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	CHAF1A	Q13111	956 aa	Predicted RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	SEC23A	Q15436	765 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	SF3A1	Q15459	793 aa	Known RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	KRT40	Q6A162	431 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	SASS6	Q6UVJ0	657 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	ZSCAN30	Q86W11	494 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	CCAR1	Q8IX12	1150 aa	Known RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	LINC00301	Q8NCQ3	95 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	RNF214	Q8ND24	703 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	TBC1D22A	Q8WUA7	517 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	GGA1	Q9UJY5	639 aa		10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	DICER1	Q9UPY3	1922 aa	Known RBP	10.87	□□□□□ -0.67
IFT122-223	ENST00000511498	CASP8AP2	Q9UKL3	1982 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	MYH1	P12882	1939 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	POLRMT	O00411	1230 aa	Known RBP	10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	PPP6R2	O75170	966 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	IL1R1	P14778	569 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	PLCG2	P16885	1265 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	MSN	P26038	577 aa	Known RBP	10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	U2AF2	P26368	475 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	PRDX5	P30044	214 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	TYRO3	Q06418	890 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	DEFB115	Q30KQ5	88 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	IFIT1B	Q5T764	474 aa	Known RBP	10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	ANO1	Q5XXA6	986 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	CTR9	Q6PD62	1173 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	CATIP	Q7Z7H3	387 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	LDHD	Q86WU2	507 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	ZNF384	Q8TF68	577 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	TACC3	Q9Y6A5	838 aa		10.86	□□□□□ -0.67
IFT122-223	ENST00000511498	MROH7-TTC4	A0A0A0MT08	1334 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	USP17L12	C9JPN9	530 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	USP17L21	D6R901	530 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	NFKBIE	O00221	500 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	SPTLC2	O15270	562 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	RANBP6	O60518	1105 aa	Known RBP	10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	NR1I2	O75469	434 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	UFL1	O94874	794 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	MMP1	P03956	469 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	PPP4C	P60510	307 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	AKAP17A	Q02040	695 aa	Known RBP	10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	HABP4	Q5JVS0	413 aa	Known RBP	10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	RAB11FIP4	Q86YS3	637 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	CCDC24	Q8N4L8	307 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	FANCB	Q8NB91	859 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	SLC26A6	Q9BXS9	759 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	ZNF287	Q9HBT7	754 aa		10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.85	□□□□□ -0.67
IFT122-223	ENST00000511498	MYH8	P13535	1937 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms