RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CYFIP1Q7L576 1253 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 DHX38Q92620 1227 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 GMLQ99445 158 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 WNT10AQ9GZT5 417 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 C7orf69Q9H7B7 122 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 DISC1Q9NRI5 854 aa5.3□□□□□ -1.56
TRAPPC11-207ENST00000511409 FANCGO15287 622 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 IGSF3O75054 1194 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 STK10O94804 968 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 BMP3P12645 472 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 RXRBP28702 533 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 EIF6P56537 245 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 RNF214Q8ND24 703 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 UBXN4Q92575 508 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 EZH1Q92800 747 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 KLHL3Q9UH77 587 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 STRIP2Q9ULQ0 834 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 ACTL7BQ9Y614 415 aa5.29□□□□□ -1.56
TRAPPC11-207ENST00000511409 ATE1O95260 518 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 IMPDH2P12268 514 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 NFIAQ12857 509 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 BEND4Q6ZU67 534 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 SMYD4Q8IYR2 804 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 C2CD4AQ8NCU7 369 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 ZNF507Q8TCN5 953 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 DNAJC2Q99543 621 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 DBNDD2Q9BQY9 259 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 YIPF2Q9BWQ6 316 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 EHMT1Q9H9B1 1298 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 LGR6Q9HBX8 967 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 FAM105AQ9NUU6 356 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 REV1Q9UBZ9 1251 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 ZNRF3Q9ULT6 936 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 R3HCC1Q9Y3T6 440 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 TACC3Q9Y6A5 838 aa5.28□□□□□ -1.56
TRAPPC11-207ENST00000511409 COBLO75128 1261 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 MAP4P27816 1152 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 IRAK1P51617 712 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 ZDHHC13Q8IUH4 622 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 KCT2Q8NC54 265 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 FBLIM1Q8WUP2 373 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 ISL2Q96A47 359 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 KCNF1Q9H3M0 494 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 DAGLAQ9Y4D2 1042 aa5.27□□□□□ -1.57
TRAPPC11-207ENST00000511409 PRR36Q9H6K5 1346 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 HMX2A2RU54 273 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 NEFMP07197 916 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 ETFBP38117 255 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 RING1Q06587 406 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 PPP2R5EQ16537 467 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 LRRFIP1Q32MZ4 808 aaKnown RBP5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 SGO2Q562F6 1265 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 CDPF1Q6NVV7 123 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 HID1Q8IV36 788 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 CKAP2LQ8IYA6 745 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 FAM13CQ8NE31 585 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 PMFBP1Q8TBY8 1022 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 ANTXR1Q9H6X2 564 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 ZNF408Q9H9D4 720 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 FBRSQ9HAH7 460 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 PCOLCE2Q9UKZ9 415 aa5.26□□□□□ -1.57
TRAPPC11-207ENST00000511409 UPK3BL1B0FP48 263 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 CHURC1-FNTBB4DL54 471 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 UPK3BL2E5RIL1 263 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 SMAD7O15105 426 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 NFICP08651 508 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 RAG1P15918 1043 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 YARSP54577 528 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 NFKBIBQ15653 356 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 TMEM201Q5SNT2 666 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 PHACTR4Q8IZ21 702 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 XAGE3Q8WTP9 111 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 ACSF2Q96CM8 615 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 SHDQ96IW2 340 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 TMEM87BQ96K49 555 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 DPH2Q9BQC3 489 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 HIRIP3Q9BW71 556 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 ACSS3Q9H6R3 686 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 GMIPQ9P107 970 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 TJP2Q9UDY2 1190 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 ADAM30Q9UKF2 790 aa5.25□□□□□ -1.57
TRAPPC11-207ENST00000511409 FAM95CA0A1B0GW59 222 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 FAM86C2PA6NEL3 165 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 PRR19A6NJB7 356 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 SLC22A31A6NKX4 558 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 NTF4P34130 210 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 GIPRP48546 466 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 CHMP4BP1P59074 171 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 MAP7Q14244 749 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 NKG7Q16617 165 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 ARSHQ5FYA8 562 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 SLC6A19Q695T7 634 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 OVOS1Q6IE37 1185 aa5.24□□□□□ -1.57
TRAPPC11-207ENST00000511409 INTS5Q6P9B9 1019 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms