RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 MINDY4BA8MYZ0 360 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 MYO1BO43795 1136 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 WDHD1O75717 1129 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 BAG3O95817 575 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 LDHCP07864 332 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 PTH1RQ03431 593 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 GRM1Q13255 1194 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 SHROOM1Q2M3G4 852 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 ZMYM1Q5SVZ6 1142 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 NBPF12Q5TAG4 269 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 ZSCAN25Q6NSZ9 544 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 SH3BP5LQ7L8J4 393 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 SLF2Q8IX21 1173 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 DCPSQ96C86 337 aaKnown RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 STRBPQ96SI9 672 aaKnown RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 MCM9Q9NXL9 1143 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 NAV1Q8NEY1 1877 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 CNTNAP1P78357 1384 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 MYH1P12882 1939 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 DDTLA6NHG4 134 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 CDC45O75419 566 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 TDO2P48775 406 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 MFAP1P55081 439 aaKnown RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 PRSS12P56730 875 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 CTDSPL2Q05D32 466 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 TTLL12Q14166 644 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 MCMDC2Q4G0Z9 681 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 USP50Q70EL3 339 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 CCDC84Q86UT8 332 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 SULF1Q8IWU6 871 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 SLC44A5Q8NCS7 719 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 CDCA5Q96FF9 252 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 DYNLL2Q96FJ2 89 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 ZBED3Q96IU2 234 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 DEFB129Q9H1M3 183 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 EPB41L4AQ9HCS5 686 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
PROM1-211ENST00000511153 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.48□□□□□ -1.37
PROM1-211ENST00000511153 FLT1P17948 1338 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 GSG1L2A8MUP6 293 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 UBE2Q2LH0YL09 131 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 SMAPO00193 183 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 FOXP2O15409 715 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 PRDM1O75626 825 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 POLR3DP05423 398 aaPredicted RBP6.47□□□□□ -1.37
PROM1-211ENST00000511153 ZFYP08048 801 aaPredicted RBP6.47□□□□□ -1.37
PROM1-211ENST00000511153 PDE4DQ08499 809 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 PNMA8AQ86V59 439 aaPredicted RBP6.47□□□□□ -1.37
PROM1-211ENST00000511153 LDHDQ86WU2 507 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 TTC13Q8NBP0 860 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 REPIN1Q9BWE0 567 aaKnown RBP6.47□□□□□ -1.37
PROM1-211ENST00000511153 CRNKL1Q9BZJ0 848 aaKnown RBP6.47□□□□□ -1.37
PROM1-211ENST00000511153 TAF6LQ9Y6J9 622 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 CCDC171Q6TFL3 1326 aa6.47□□□□□ -1.37
PROM1-211ENST00000511153 PPP1R3GB7ZBB8 358 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 USP17L12C9JPN9 530 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 USP17L21D6R901 530 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 CELF2O95319 508 aaKnown RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 GDF11O95390 407 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 HSPD1P10809 573 aaKnown RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 PLCD1P51178 756 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 HDLBPQ00341 1268 aaKnown RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 RRP12Q5JTH9 1297 aaKnown RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 APOBEC3FQ8IUX4 373 aaKnown RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 ZNF687Q8N1G0 1237 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 NKX2-3Q8TAU0 364 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 CSRNP1Q96S65 589 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 OSBPL5Q9H0X9 879 aaPredicted RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 DCP1AQ9NPI6 582 aaPredicted RBP6.46□□□□□ -1.38
PROM1-211ENST00000511153 HELLSQ9NRZ9 838 aa6.46□□□□□ -1.38
PROM1-211ENST00000511153 ARHGAP33O14559 1287 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 SGSM2O43147 1006 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 PPP4CP60510 307 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 LRRFIP1Q32MZ4 808 aaKnown RBP6.45□□□□□ -1.38
PROM1-211ENST00000511153 CTR9Q6PD62 1173 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 CDC37L1Q7L3B6 337 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 IFNL3Q8IZI9 196 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 CRACR2BQ8N4Y2 399 aaPredicted RBP6.45□□□□□ -1.38
PROM1-211ENST00000511153 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 TEPSINQ96N21 525 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 ZBED2Q9BTP6 218 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 NAPBQ9H115 298 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 TOMM22Q9NS69 142 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
PROM1-211ENST00000511153 ADGRG1Q9Y653 693 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 TACC3Q9Y6A5 838 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 SSC5DA1L4H1 1573 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 SIPA1L1O43166 1804 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 FOCADQ5VW36 1801 aa6.45□□□□□ -1.38
PROM1-211ENST00000511153 PATL2C9JE40 543 aaKnown RBP6.44□□□□□ -1.38
PROM1-211ENST00000511153 HIP1O00291 1037 aa6.44□□□□□ -1.38
PROM1-211ENST00000511153 FGAP02671 866 aa6.44□□□□□ -1.38
PROM1-211ENST00000511153 INPP5BP32019 993 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms