RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
CHD1-206ENST00000511067 DNAJA2O60884 412 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 ADAM23O75077 832 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 APBA3O96018 575 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 NEFMP07197 916 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 FXNQ16595 210 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 DYMQ7RTS9 669 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
CHD1-206ENST00000511067 TMEM87BQ96K49 555 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 TJP2Q9UDY2 1190 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 USP21Q9UK80 565 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 ACTL7BQ9Y614 415 aa8.43□□□□□ -1.06
CHD1-206ENST00000511067 LOC100996750A0A140TA64 210 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 DRD2P14416 443 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 CCNFP41002 786 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 ASPAP45381 313 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 BMS1Q14692 1282 aaKnown RBP8.42□□□□□ -1.06
CHD1-206ENST00000511067 DDR2Q16832 855 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 UVSSAQ2YD98 709 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 CDC37L1Q7L3B6 337 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 MRFAP1L1Q96HT8 127 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 PIF1Q9H611 641 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 CDK11AQ9UQ88 783 aaPredicted RBP8.42□□□□□ -1.06
CHD1-206ENST00000511067 MSRB2Q9Y3D2 182 aa8.42□□□□□ -1.06
CHD1-206ENST00000511067 A0A1W2PQH9 124 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
CHD1-206ENST00000511067 PREPP48147 710 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 PPP2R5EQ16537 467 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 FAM13CQ8NE31 585 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 ISL2Q96A47 359 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 CCDC113Q9H0I3 377 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 TNKS2Q9H2K2 1166 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 FBRSQ9HAH7 460 aa8.41□□□□□ -1.06
CHD1-206ENST00000511067 SART1O43290 800 aaKnown RBP8.4□□□□□ -1.06
CHD1-206ENST00000511067 FURINP09958 794 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 ACRP10323 421 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 RAG1P15918 1043 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
CHD1-206ENST00000511067 RASA3Q14644 834 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 ARSHQ5FYA8 562 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 SMYD4Q8IYR2 804 aaPredicted RBP8.4□□□□□ -1.06
CHD1-206ENST00000511067 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
CHD1-206ENST00000511067 FAM105AQ9NUU6 356 aa8.4□□□□□ -1.06
CHD1-206ENST00000511067 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
CHD1-206ENST00000511067 CHURC1-FNTBB4DL54 471 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 GLB1P16278 677 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHD1-206ENST00000511067 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 ZNF746Q6NUN9 644 aaPredicted RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 UNC5AQ6ZN44 842 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 CELF2-AS1Q8N7Q2 184 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 DEPDC7Q96QD5 511 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 SRPK1Q96SB4 655 aaKnown RBP8.39□□□□□ -1.07
CHD1-206ENST00000511067 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 YIPF2Q9BWQ6 316 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 ACSS3Q9H6R3 686 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 SNTG2Q9NY99 539 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 PCOLCE2Q9UKZ9 415 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 MAPK8IP1Q9UQF2 711 aa8.39□□□□□ -1.07
CHD1-206ENST00000511067 RGS13O14921 159 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 SMARCA5O60264 1052 aaPredicted RBP8.38□□□□□ -1.07
CHD1-206ENST00000511067 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
CHD1-206ENST00000511067 ALX3O95076 343 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 CST3P01034 146 aaPredicted RBP8.38□□□□□ -1.07
CHD1-206ENST00000511067 NOS3P29474 1203 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 GATA4P43694 442 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 NKG7Q16617 165 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 FOXQ1Q9C009 403 aa8.38□□□□□ -1.07
CHD1-206ENST00000511067 CADPSQ9ULU8 1353 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 TLDC2A0PJX2 215 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 USP11P51784 963 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 RASGRF1Q13972 1273 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 NCAPHQ15003 741 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD1-206ENST00000511067 CYB5D2Q8WUJ1 264 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
CHD1-206ENST00000511067 SSU72Q9NP77 194 aaKnown RBP8.37□□□□□ -1.07
CHD1-206ENST00000511067 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 LRIG2O94898 1065 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
CHD1-206ENST00000511067 PRAMEF13Q5VWM6 474 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 UBE3DQ7Z6J8 389 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 DZIP1LQ8IYY4 767 aaKnown RBP8.36□□□□□ -1.07
CHD1-206ENST00000511067 PHACTR4Q8IZ21 702 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 EZH1Q92800 747 aaPredicted RBP8.36□□□□□ -1.07
CHD1-206ENST00000511067 DHRS1Q96LJ7 313 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms