RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 CHGBP05060 677 aa28.59■■■□□ 2.17
ATP2C1-217ENST00000509662 RGS19P49795 217 aa28.59■■■□□ 2.17
ATP2C1-217ENST00000509662 WDR18Q9BV38 432 aa28.59■■■□□ 2.17
ATP2C1-217ENST00000509662 AGTPBP1Q9UPW5 1226 aa28.59■■■□□ 2.17
ATP2C1-217ENST00000509662 SIPA1L1O43166 1804 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 ATAD5Q96QE3 1844 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 CYP2C8P10632 490 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 PABPC4Q13310 644 aaKnown RBP eCLIP28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 SLFNL1Q499Z3 407 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 PLEKHM2Q8IWE5 1019 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 LCORLQ8N3X6 602 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 MCM9Q9NXL9 1143 aa28.58■■■□□ 2.17
ATP2C1-217ENST00000509662 ARMT1Q9H993 441 aa28.57■■■□□ 2.16
ATP2C1-217ENST00000509662 PNMA3Q9UL41 463 aa28.57■■■□□ 2.16
ATP2C1-217ENST00000509662 MBD4O95243 580 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 GDF11O95390 407 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 NEFLP07196 543 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 HMGCS2P54868 508 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 TATDN1Q6P1N9 297 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 ADGRA2Q96PE1 1338 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 OSBPL3Q9H4L5 887 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 ZBTB21Q9ULJ3 1066 aa28.56■■■□□ 2.16
ATP2C1-217ENST00000509662 PTPRFP10586 1907 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 PDE4AP27815 886 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 PLCD1P51178 756 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 CERKLQ49MI3 558 aaPredicted RBP28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 SH3D19Q5HYK7 790 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 SMCR8Q8TEV9 937 aaPredicted RBP28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 SDR42E1Q8WUS8 393 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 DDRGK1Q96HY6 314 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 DCP1AQ9NPI6 582 aaPredicted RBP28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 ATP8A2Q9NTI2 1148 aa28.55■■■□□ 2.16
ATP2C1-217ENST00000509662 MYH7P12883 1935 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 C19orf81C9J6K1 198 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 PRMT2P55345 433 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 SOX10P56693 466 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 BACE1P56817 501 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 CAP1Q01518 475 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 MLLT1Q03111 559 aaPredicted RBP28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 TMOD4Q9NZQ9 345 aa28.54■■■□□ 2.16
ATP2C1-217ENST00000509662 USP17L10C9JJH3 530 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 HOXD10P28358 340 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 JAG1P78504 1218 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 LRRFIP1Q32MZ4 808 aaKnown RBP28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 TREML2Q5T2D2 321 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 AMOTL1Q8IY63 956 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 CABP5Q9NP86 173 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 TAOK2Q9UL54 1235 aa28.53■■■□□ 2.16
ATP2C1-217ENST00000509662 FMNL1O95466 1100 aaPredicted RBP28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 GH2P01242 217 aa28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 BCRP11274 1271 aa28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 OSBPP22059 807 aa28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 PSMC4P43686 418 aa28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 ARHGAP39Q9C0H5 1083 aa28.52■■■□□ 2.16
ATP2C1-217ENST00000509662 MTMR2Q13614 643 aa28.51■■■□□ 2.15
ATP2C1-217ENST00000509662 ABCB5Q2M3G0 1257 aa28.51■■■□□ 2.15
ATP2C1-217ENST00000509662 NBPF11Q86T75 865 aa28.51■■■□□ 2.15
ATP2C1-217ENST00000509662 FSD1Q9BTV5 496 aa28.51■■■□□ 2.15
ATP2C1-217ENST00000509662 DDX60LQ5H9U9 1706 aaKnown RBP28.5■■■□□ 2.15
ATP2C1-217ENST00000509662 RNF113AO15541 343 aaKnown RBP28.5■■■□□ 2.15
ATP2C1-217ENST00000509662 PRKAB2O43741 272 aa28.5■■■□□ 2.15
ATP2C1-217ENST00000509662 ZFYP08048 801 aaPredicted RBP28.5■■■□□ 2.15
ATP2C1-217ENST00000509662 NAV1Q8NEY1 1877 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 FCGRTP55899 365 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 GABPAQ06546 454 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 SHROOM1Q2M3G4 852 aaPredicted RBP28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 CENPQQ7L2Z9 268 aaPredicted RBP28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 APPBP2Q92624 585 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 EVI5LQ96CN4 794 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 TRIM47Q96LD4 638 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 PUS7LQ9H0K6 701 aaKnown RBP28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 SWAP70Q9UH65 585 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 SLC4A4Q9Y6R1 1079 aa28.49■■■□□ 2.15
ATP2C1-217ENST00000509662 ECM2O94769 699 aaPredicted RBP28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 SHMT1P34896 483 aa28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 GCLCP48506 637 aaPredicted RBP28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 RAB3GAP1Q15042 981 aa28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 SLC9C1Q4G0N8 1177 aa28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 PTCH2Q9Y6C5 1203 aa28.48■■■□□ 2.15
ATP2C1-217ENST00000509662 USP17L2Q6R6M4 530 aa28.47■■■□□ 2.15
ATP2C1-217ENST00000509662 OSBP2Q969R2 916 aa28.47■■■□□ 2.15
ATP2C1-217ENST00000509662 ARMC5Q96C12 935 aa28.47■■■□□ 2.15
ATP2C1-217ENST00000509662 SRRDQ9UH36 339 aa28.47■■■□□ 2.15
ATP2C1-217ENST00000509662 HOXA7P31268 230 aaPredicted RBP28.46■■■□□ 2.15
ATP2C1-217ENST00000509662 FEZ1Q99689 392 aa28.46■■■□□ 2.15
ATP2C1-217ENST00000509662 ASCC2Q9H1I8 757 aaPredicted RBP28.46■■■□□ 2.15
ATP2C1-217ENST00000509662 LOC285556D6RIA3 1793 aa28.46■■■□□ 2.15
ATP2C1-217ENST00000509662 CYP2D6P10635 497 aa28.45■■■□□ 2.14
ATP2C1-217ENST00000509662 CTGFP29279 349 aa28.45■■■□□ 2.14
ATP2C1-217ENST00000509662 IRX3P78415 501 aaPredicted RBP28.45■■■□□ 2.14
ATP2C1-217ENST00000509662 USP17L12C9JPN9 530 aa28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 USP17L21D6R901 530 aa28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 MPHOSPH10O00566 681 aaKnown RBP28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 USP14P54578 494 aa28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 C12orf60Q5U649 245 aa28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 ANKRD13CQ8N6S4 541 aa28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 STRBPQ96SI9 672 aaKnown RBP28.44■■■□□ 2.14
ATP2C1-217ENST00000509662 M0R2C6 588 aa28.43■■■□□ 2.14
ATP2C1-217ENST00000509662 FAM110CQ1W6H9 321 aa28.43■■■□□ 2.14
ATP2C1-217ENST00000509662 ZMYM1Q5SVZ6 1142 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms