RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 IFIT1BQ5T764 474 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 IQCA1Q86XH1 822 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 SMARCE1Q969G3 411 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 BRIP1Q9BX63 1249 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 SERTAD1Q9UHV2 236 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 PCP11498 1178 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 MLKLQ8NB16 471 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 OXER1Q8TDS5 423 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 DPF2Q92785 391 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 RBM28Q9NW13 759 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 MAN1B1Q9UKM7 699 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 VSTM4Q8IW00 320 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 CICQ96RK0 1608 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM1P0DP23 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM2P0DP24 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM3P0DP25 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 BMP6P22004 513 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 SMAP1Q8IYB5 467 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 TRIML1Q8N9V2 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 KRT2P35908 639 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 DYNLL1P63167 89 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 PDE4BQ07343 736 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 ERO1AQ96HE7 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-228ENST00000509552 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
CCHCR1-228ENST00000509552 SARSP49591 514 aaKnown RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 FEZ1Q99689 392 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 ZMYND15Q9H091 742 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 CSRNP2Q9H175 543 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 ZNF215Q9UL58 517 aaPredicted RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 MORC2Q9Y6X9 1032 aaPredicted RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 SEMA3EO15041 775 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 SLU7O95391 586 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PRR29P0C7W0 189 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 CDK11BP21127 795 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 CBX1P83916 185 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 MORC3Q14149 939 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PDILTQ8N807 584 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PHF20Q9BVI0 1012 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 BMP15O95972 392 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 NAA30Q147X3 362 aaPredicted RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 PKN1Q16512 942 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 ENOX1Q8TC92 643 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA31A5Q5VU36 1347 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA31A7Q8IWB4 1347 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 DUOX1Q9NRD9 1551 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 COL4A1P02462 1669 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 HOMER1Q86YM7 354 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 AATFQ9NY61 560 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 V9GY48 417 aaPredicted RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 MYH6P13533 1939 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 CACNA1SQ13698 1873 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 PRDM1O75626 825 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 DDAH1O94760 285 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 FGRP09769 529 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 NRAPQ86VF7 1730 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 WTIPA6NIX2 430 aaPredicted RBP20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 SMIM22K7EJ46 135 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 FUT2Q10981 343 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 CTR9Q6PD62 1173 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 SYT10Q6XYQ8 523 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 KCNQ2O43526 872 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP17L21D6R901 530 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 PLEKHA8P1O95397 391 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 TROAPQ12815 778 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FERMT2Q96AC1 680 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP49Q70CQ1 688 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA20Q8TB22 786 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 L2HGDHQ9H9P8 463 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 A0A1B0GUL6 1792 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 SPDYE4A6NLX3 237 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 ZSCAN12O43309 604 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms