RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
HMGCR-208ENST00000509431 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
HMGCR-208ENST00000509431 RAG1P15918 1043 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 PRDX5P30044 214 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 VGLL2Q8N8G2 317 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 PORCNQ9H237 461 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 RBPJLQ9UBG7 517 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 PLXNA1Q9UIW2 1896 aa17.1■□□□□ 0.33
HMGCR-208ENST00000509431 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 CLTBP09497 229 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 IGFBP4P22692 258 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 MRE11P49959 708 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
HMGCR-208ENST00000509431 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
HMGCR-208ENST00000509431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.331e-9■■■□□ 16.1
HMGCR-208ENST00000509431 SLC15A5A6NIM6 579 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 HOXC6P09630 235 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 ITGB8P26012 769 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 CCNA1P78396 465 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 TLE2Q04725 743 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.32
HMGCR-208ENST00000509431 Q3C1V9 767 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 WDR18Q9BV38 432 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 FLRT1Q9NZU1 646 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
HMGCR-208ENST00000509431 GAKO14976 1311 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 CYBAP13498 195 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 CAP2P40123 477 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 BACE1P56817 501 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 PBX4Q9BYU1 374 aa17.07■□□□□ 0.32
HMGCR-208ENST00000509431 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
HMGCR-208ENST00000509431 C19orf81C9J6K1 198 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 PEX10O60683 326 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
HMGCR-208ENST00000509431 FGFR2P21802 821 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 ADCYAP1R1P41586 468 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
HMGCR-208ENST00000509431 DDX4Q9NQI0 724 aaKnown RBP17.06■□□□□ 0.32
HMGCR-208ENST00000509431 SLC5A1P13866 664 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 PICALMQ13492 652 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 MTMR2Q13614 643 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 RAB30Q15771 203 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
HMGCR-208ENST00000509431 ERC2O15083 957 aa17.04■□□□□ 0.32
HMGCR-208ENST00000509431 PTPREP23469 700 aa17.04■□□□□ 0.32
HMGCR-208ENST00000509431 CYP2C19P33261 490 aa17.04■□□□□ 0.32
HMGCR-208ENST00000509431 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
HMGCR-208ENST00000509431 C11orf16Q9NQ32 467 aa17.04■□□□□ 0.32
HMGCR-208ENST00000509431 MSRAQ9UJ68 235 aa17.04■□□□□ 0.32
HMGCR-208ENST00000509431 APAF1O14727 1248 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 SEPT4O43236 478 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 IGHA2P01877 340 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 PBX2P40425 430 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 KCNQ1P51787 676 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 TFF2Q03403 129 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 LRRC41Q15345 812 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 LPIN2Q92539 896 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
HMGCR-208ENST00000509431 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
HMGCR-208ENST00000509431 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
HMGCR-208ENST00000509431 FAM196BA6NMK8 535 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
HMGCR-208ENST00000509431 GRB14Q14449 540 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 WDR78Q5VTH9 848 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
HMGCR-208ENST00000509431 FERMT2Q96AC1 680 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.324e-17■■□□□ 14.2
HMGCR-208ENST00000509431 HERC5Q9UII4 1024 aaKnown RBP17.02■□□□□ 0.32
HMGCR-208ENST00000509431 PHF24Q9UPV7 400 aa17.02■□□□□ 0.32
HMGCR-208ENST00000509431 F6X3S4 739 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 SEMA3EO15041 775 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 ASNSP08243 561 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGCR-208ENST00000509431 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 SLC44A5Q8NCS7 719 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 NPLOC4Q8TAT6 608 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
HMGCR-208ENST00000509431 PRR33A8MZF0 331 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 USP17L10C9JJH3 530 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
HMGCR-208ENST00000509431 BTDP43251 543 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
HMGCR-208ENST00000509431 DZIP1Q86YF9 867 aaKnown RBP17■□□□□ 0.31
HMGCR-208ENST00000509431 KAZALD1Q96I82 304 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms