RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CYR61O00622 381 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 AAMPQ13685 434 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 ZFYVE27Q5T4F4 411 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 LILRA2Q8N149 483 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 SNX29Q8TEQ0 813 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 INTS4Q96HW7 963 aaKnown RBP6.43□□□□□ -1.38
NIPBL-206ENST00000509429 ARID3AQ99856 593 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 ANP32EQ9BTT0 268 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 ZC3H12CQ9C0D7 883 aaKnown RBP6.43□□□□□ -1.38
NIPBL-206ENST00000509429 CWC22Q9HCG8 908 aaKnown RBP6.43□□□□□ -1.38
NIPBL-206ENST00000509429 AMOTL2Q9Y2J4 779 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 ST14Q9Y5Y6 855 aa6.43□□□□□ -1.38
NIPBL-206ENST00000509429 PDGFAP04085 211 aa6.42□□□□□ -1.38
NIPBL-206ENST00000509429 TCF12Q99081 682 aa6.42□□□□□ -1.38
NIPBL-206ENST00000509429 C19orf44Q9H6X5 657 aa6.42□□□□□ -1.38
NIPBL-206ENST00000509429 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
NIPBL-206ENST00000509429 PRR33A8MZF0 331 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 C1QTNF3-AMACRE9PGA6 284 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 RAD21O60216 631 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 ZEB1P37275 1124 aaPredicted RBP6.41□□□□□ -1.38
NIPBL-206ENST00000509429 C22orf34Q6ZV56 151 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 MFSD4AQ8N468 514 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 ADAMTS10Q9H324 1103 aa6.41□□□□□ -1.38
NIPBL-206ENST00000509429 EPB41L4AQ9HCS5 686 aaPredicted RBP6.41□□□□□ -1.38
NIPBL-206ENST00000509429 YBX2Q9Y2T7 364 aaKnown RBP6.41□□□□□ -1.38
NIPBL-206ENST00000509429 C6P13671 934 aa6.4□□□□□ -1.38
NIPBL-206ENST00000509429 PDE6BP35913 854 aa6.4□□□□□ -1.38
NIPBL-206ENST00000509429 ZNF576Q9H609 170 aa6.4□□□□□ -1.38
NIPBL-206ENST00000509429 LIN7BQ9HAP6 207 aa6.4□□□□□ -1.38
NIPBL-206ENST00000509429 ZFPM1Q8IX07 1006 aa6.39□□□□□ -1.39
NIPBL-206ENST00000509429 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
NIPBL-206ENST00000509429 PDZD8Q8NEN9 1154 aa6.39□□□□□ -1.39
NIPBL-206ENST00000509429 NAP1L5Q96NT1 182 aaPredicted RBP6.39□□□□□ -1.39
NIPBL-206ENST00000509429 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
NIPBL-206ENST00000509429 MZF1P28698 734 aaPredicted RBP6.38□□□□□ -1.39
NIPBL-206ENST00000509429 ERVK-24P63145 666 aa6.38□□□□□ -1.39
NIPBL-206ENST00000509429 PPP1R12CQ9BZL4 782 aa6.38□□□□□ -1.39
NIPBL-206ENST00000509429 FOXD3Q9UJU5 478 aaPredicted RBP6.38□□□□□ -1.39
NIPBL-206ENST00000509429 CLSTN1O94985 981 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 TACR2P21452 398 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 ACVRL1P37023 503 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
NIPBL-206ENST00000509429 CCDC136Q96JN2 1154 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 CAPN6Q9Y6Q1 641 aa6.37□□□□□ -1.39
NIPBL-206ENST00000509429 ACIN1Q9UKV3 1341 aaKnown RBP6.36□□□□□ -1.39
NIPBL-206ENST00000509429 ESR1P03372 595 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 GSTP1P09211 210 aaKnown RBP6.36□□□□□ -1.39
NIPBL-206ENST00000509429 TIGD5Q53EQ6 642 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 UBXN11Q5T124 520 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 TMPRSS7Q7RTY8 843 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 OXR1Q8N573 874 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 SMPD4Q9NXE4 827 aa6.36□□□□□ -1.39
NIPBL-206ENST00000509429 IRX6P78412 446 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-206ENST00000509429 HNRNPA0Q13151 305 aaKnown RBP6.35□□□□□ -1.39
NIPBL-206ENST00000509429 CPZQ66K79 652 aa6.35□□□□□ -1.39
NIPBL-206ENST00000509429 CNKSR3Q6P9H4 555 aa6.35□□□□□ -1.39
NIPBL-206ENST00000509429 CXXC1Q9P0U4 656 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-206ENST00000509429 N4BP3O15049 544 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 ITPKAP23677 461 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 EPHB3P54753 998 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 GLMNQ92990 594 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 PSMD1Q99460 953 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 ZFYVE28Q9HCC9 887 aa6.34□□□□□ -1.39
NIPBL-206ENST00000509429 FITM1A5D6W6 292 aa6.33□□□□□ -1.4
NIPBL-206ENST00000509429 LMOD1P29536 600 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-206ENST00000509429 SRSF3P84103 164 aaKnown RBP6.33□□□□□ -1.4
NIPBL-206ENST00000509429 NR0B2Q15466 257 aa6.33□□□□□ -1.4
NIPBL-206ENST00000509429 Q8N1X5 172 aa6.33□□□□□ -1.4
NIPBL-206ENST00000509429 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
NIPBL-206ENST00000509429 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
NIPBL-206ENST00000509429 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-206ENST00000509429 POLR3DP05423 398 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-206ENST00000509429 SNX17Q15036 470 aa6.32□□□□□ -1.4
NIPBL-206ENST00000509429 TP53I13Q8NBR0 393 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-206ENST00000509429 RGS22Q8NE09 1264 aa6.32□□□□□ -1.4
NIPBL-206ENST00000509429 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
NIPBL-206ENST00000509429 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
NIPBL-206ENST00000509429 TPX2Q9ULW0 747 aaKnown RBP6.32□□□□□ -1.4
NIPBL-206ENST00000509429 CLSPNQ9HAW4 1339 aa6.31□□□□□ -1.4
NIPBL-206ENST00000509429 HRKO00198 91 aa6.31□□□□□ -1.4
NIPBL-206ENST00000509429 KCNC1P48547 511 aa6.31□□□□□ -1.4
NIPBL-206ENST00000509429 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
NIPBL-206ENST00000509429 TMEFF1Q8IYR6 380 aa6.31□□□□□ -1.4
NIPBL-206ENST00000509429 C1QTNF3Q9BXJ4 246 aa6.31□□□□□ -1.4
NIPBL-206ENST00000509429 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
NIPBL-206ENST00000509429 OR14I1A6ND48 311 aa6.3□□□□□ -1.4
NIPBL-206ENST00000509429 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
NIPBL-206ENST00000509429 EHHADHQ08426 723 aa6.3□□□□□ -1.4
NIPBL-206ENST00000509429 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
NIPBL-206ENST00000509429 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-206ENST00000509429 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
NIPBL-206ENST00000509429 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
NIPBL-206ENST00000509429 A0A0U1RQG5 324 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-206ENST00000509429 SLITRK5O94991 958 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 ZGLP1P0C6A0 271 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 NCLP19338 710 aaKnown RBP6.29□□□□□ -1.4
NIPBL-206ENST00000509429 NTF4P34130 210 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms