RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SH3D19Q5HYK7 790 aa17.76■□□□□ 0.43
HMGCL-208ENST00000509389 METTL16Q86W50 562 aaKnown RBP17.76■□□□□ 0.43
HMGCL-208ENST00000509389 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
HMGCL-208ENST00000509389 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
HMGCL-208ENST00000509389 AS3MTQ9HBK9 375 aa17.76■□□□□ 0.43
HMGCL-208ENST00000509389 PALD1Q9ULE6 856 aa17.76■□□□□ 0.43
HMGCL-208ENST00000509389 ELNP15502 786 aa17.75■□□□□ 0.43
HMGCL-208ENST00000509389 CYP7A1P22680 504 aa17.75■□□□□ 0.43
HMGCL-208ENST00000509389 PABPC4Q13310 644 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGCL-208ENST00000509389 IRF5Q13568 498 aa17.75■□□□□ 0.43
HMGCL-208ENST00000509389 WDR18Q9BV38 432 aa17.75■□□□□ 0.43
HMGCL-208ENST00000509389 UNC93B1Q9H1C4 597 aa17.75■□□□□ 0.43
HMGCL-208ENST00000509389 ASNSP08243 561 aa17.74■□□□□ 0.43
HMGCL-208ENST00000509389 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-208ENST00000509389 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-208ENST00000509389 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
HMGCL-208ENST00000509389 COA7Q96BR5 231 aa17.74■□□□□ 0.43
HMGCL-208ENST00000509389 ASCC2Q9H1I8 757 aaPredicted RBP17.74■□□□□ 0.43
HMGCL-208ENST00000509389 SAP30BPQ9UHR5 308 aaKnown RBP17.74■□□□□ 0.43
HMGCL-208ENST00000509389 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
HMGCL-208ENST00000509389 MYH1P12882 1939 aa17.74■□□□□ 0.43
HMGCL-208ENST00000509389 H0YGN5 161 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
HMGCL-208ENST00000509389 INHAP05111 366 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 BACE1P56817 501 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
HMGCL-208ENST00000509389 UBE2Q1Q7Z7E8 422 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
HMGCL-208ENST00000509389 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
HMGCL-208ENST00000509389 GDF11O95390 407 aa17.72■□□□□ 0.43
HMGCL-208ENST00000509389 MTMR2Q13614 643 aa17.72■□□□□ 0.43
HMGCL-208ENST00000509389 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
HMGCL-208ENST00000509389 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
HMGCL-208ENST00000509389 COLQQ9Y215 455 aaPredicted RBP17.72■□□□□ 0.43
HMGCL-208ENST00000509389 SGPL1O95470 568 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 AACSQ86V21 672 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 DPF3Q92784 378 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 ZBTB21Q9ULJ3 1066 aa17.71■□□□□ 0.43
HMGCL-208ENST00000509389 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
HMGCL-208ENST00000509389 MORF4L1Q9UBU8 362 aa17.7■□□□□ 0.42
HMGCL-208ENST00000509389 USP17L10C9JJH3 530 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 HMMRO75330 724 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 HOXA7P31268 230 aaPredicted RBP17.69■□□□□ 0.42
HMGCL-208ENST00000509389 USP5P45974 858 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 IRX3P78415 501 aaPredicted RBP17.69■□□□□ 0.42
HMGCL-208ENST00000509389 MAP3K12Q12852 859 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 P2RX7Q99572 595 aaKnown RBP17.69■□□□□ 0.42
HMGCL-208ENST00000509389 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 PLXNB2O15031 1838 aa17.69■□□□□ 0.42
HMGCL-208ENST00000509389 FARP2O94887 1054 aaPredicted RBP17.68■□□□□ 0.42
HMGCL-208ENST00000509389 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
HMGCL-208ENST00000509389 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
HMGCL-208ENST00000509389 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
HMGCL-208ENST00000509389 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
HMGCL-208ENST00000509389 PAK6Q9NQU5 681 aaPredicted RBP17.68■□□□□ 0.42
HMGCL-208ENST00000509389 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
HMGCL-208ENST00000509389 PEX10O60683 326 aa17.67■□□□□ 0.42
HMGCL-208ENST00000509389 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
HMGCL-208ENST00000509389 FXR1P51114 621 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGCL-208ENST00000509389 NUCB1Q02818 461 aa17.67■□□□□ 0.42
HMGCL-208ENST00000509389 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
HMGCL-208ENST00000509389 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
HMGCL-208ENST00000509389 GH2P01242 217 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 CAPN2P17655 700 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 HERVK_113P62684 666 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 EHD4Q9H223 541 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 TXNRD2Q9NNW7 524 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 EMILIN3Q9NT22 766 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 HMGCRP04035 888 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 GPRC5AQ8NFJ5 357 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 RIOK1Q9BRS2 568 aaKnown RBP17.66■□□□□ 0.42
HMGCL-208ENST00000509389 CRISPLD2Q9H0B8 497 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGCL-208ENST00000509389 RBPJLQ9UBG7 517 aa17.66■□□□□ 0.42
HMGCL-208ENST00000509389 APBB1O00213 710 aa17.65■□□□□ 0.42
HMGCL-208ENST00000509389 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
HMGCL-208ENST00000509389 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
HMGCL-208ENST00000509389 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
HMGCL-208ENST00000509389 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
HMGCL-208ENST00000509389 TRIM32Q13049 653 aa17.64■□□□□ 0.41
HMGCL-208ENST00000509389 Q3C1V9 767 aa17.64■□□□□ 0.41
HMGCL-208ENST00000509389 POTEEQ6S8J3 1075 aa17.64■□□□□ 0.41
HMGCL-208ENST00000509389 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
HMGCL-208ENST00000509389 NAV1Q8NEY1 1877 aa17.64■□□□□ 0.41
HMGCL-208ENST00000509389 DDX60LQ5H9U9 1706 aaKnown RBP17.63■□□□□ 0.41
HMGCL-208ENST00000509389 PDE6AP16499 860 aa17.63■□□□□ 0.41
HMGCL-208ENST00000509389 PLCD1P51178 756 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms