RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 KRT23Q9C075 422 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 TLL2Q9Y6L7 1015 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 MYH1P12882 1939 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 GH2P01242 217 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 HSPA4P34932 840 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 VGLL4Q14135 290 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
RNF4-213ENST00000509388 TBC1D10CQ8IV04 446 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 ESR2Q92731 530 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 ELP3Q9H9T3 547 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
RNF4-213ENST00000509388 CDK5RAP2Q96SN8 1893 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 ORC4O43929 436 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 SEC24BO95487 1268 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 FGRP09769 529 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 AKR1B1P15121 316 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 RASA1P20936 1047 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 NT5C2P49902 561 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
RNF4-213ENST00000509388 TFAP4Q01664 338 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 KRT32Q14532 448 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
RNF4-213ENST00000509388 RGMBQ6NW40 437 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 TMEM179Q6ZVK1 233 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
RNF4-213ENST00000509388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
RNF4-213ENST00000509388 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
RNF4-213ENST00000509388 E7EWF7 191 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 RRP1BQ14684 758 aaKnown RBP17.53■□□□□ 0.4
RNF4-213ENST00000509388 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 CLMNQ96JQ2 1002 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 NBPF3Q9H094 633 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 AS3MTQ9HBK9 375 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 ZBTB21Q9ULJ3 1066 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 PAPPA2Q9BXP8 1791 aa17.53■□□□□ 0.4
RNF4-213ENST00000509388 DEFB115Q30KQ5 88 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 ERO1BQ86YB8 467 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 HHIPL1Q96JK4 782 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 SNCAIPQ9Y6H5 919 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 ZHX2Q9Y6X8 837 aa17.52■□□□□ 0.4
RNF4-213ENST00000509388 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.39
RNF4-213ENST00000509388 NEDD4P46934 1319 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 B4E1Z4 1266 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 KDM4AO75164 1064 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 HSPA6P17066 643 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 PTPRAP18433 802 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 PPATQ06203 517 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 GRM1Q13255 1194 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 SEPT2Q15019 361 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
RNF4-213ENST00000509388 PSMA5P28066 241 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 TSGA10IPQ3SY00 556 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 RASEFQ8IZ41 740 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
RNF4-213ENST00000509388 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 ECE1P42892 770 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 JAG1P78504 1218 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 ICA1Q05084 483 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
RNF4-213ENST00000509388 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 STOX1Q6ZVD7 989 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 KCNB2Q92953 911 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 FEZ1Q99689 392 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 UBAC1Q9BSL1 405 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 ARHGEF10LQ9HCE6 1279 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
RNF4-213ENST00000509388 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 ERICH2A1L162 156 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 HMGB1P09429 215 aaKnown RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 MCM5P33992 734 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 MKRN3Q13064 507 aaKnown RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 PPIL2Q13356 520 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 ZNF280CQ8ND82 737 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 WNK4Q96J92 1243 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 C22orf23Q9BZE7 217 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms