RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 NT5C1AQ9BXI3 368 aa8.64□□□□□ -1.03
COL6A4P2-204ENST00000509090 SLITRK5O94991 958 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 EOMESO95936 686 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 PLCG1P19174 1290 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 SPINK2P20155 84 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 PRAMEF13Q5VWM6 474 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 DTX1Q86Y01 620 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 EAF1Q96JC9 268 aaPredicted RBP8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 SPON2Q9BUD6 331 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 PCDHGB7Q9Y5F8 929 aa8.63□□□□□ -1.03
COL6A4P2-204ENST00000509090 CWF19L2Q2TBE0 894 aaKnown RBP8.62□□□□□ -1.03
COL6A4P2-204ENST00000509090 KIAA0825Q8IV33 1275 aa8.62□□□□□ -1.03
COL6A4P2-204ENST00000509090 LRRC4CQ9HCJ2 640 aa8.62□□□□□ -1.03
COL6A4P2-204ENST00000509090 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
COL6A4P2-204ENST00000509090 ZC3H7BQ9UGR2 993 aaKnown RBP8.62□□□□□ -1.03
COL6A4P2-204ENST00000509090 IGF2BP3O00425 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 GRIN3BO60391 1043 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 HTR3BO95264 441 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 SLITRK4Q8IW52 837 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 PCMTD2Q9NV79 361 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 REV1Q9UBZ9 1251 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 U3KQE9 123 aa8.61□□□□□ -1.03
COL6A4P2-204ENST00000509090 LOC100996750A0A140TA64 210 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 ATE1O95260 518 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 OXCT1P55809 520 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 APOBRQ0VD83 1088 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 C9orf131Q5VYM1 1079 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 NT5DC4Q86YG4 428 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 RIN3Q8TB24 985 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 MIPEPQ99797 713 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 KRTAP4-6Q9BYQ5 205 aa8.6□□□□□ -1.03
COL6A4P2-204ENST00000509090 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 UPK3BL1B0FP48 263 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 UPK3BL2E5RIL1 263 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 SEZ6Q53EL9 994 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 LETMD1Q6P1Q0 360 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 FAM181AQ8N9Y4 354 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 NKD1Q969G9 470 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 DPH2Q9BQC3 489 aaPredicted RBP8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 EHMT1Q9H9B1 1298 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
COL6A4P2-204ENST00000509090 PRNPP04156 253 aa8.58□□□□□ -1.04
COL6A4P2-204ENST00000509090 SLFN12Q8IYM2 578 aa8.58□□□□□ -1.04
COL6A4P2-204ENST00000509090 XAGE3Q8WTP9 111 aa8.58□□□□□ -1.04
COL6A4P2-204ENST00000509090 PCDHB14Q9Y5E9 798 aa8.58□□□□□ -1.04
COL6A4P2-204ENST00000509090 CHURC1-FNTBB4DL54 471 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 DNAJA2O60884 412 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 RBM25P49756 843 aaKnown RBP8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 FAM13CQ8NE31 585 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 BSDC1Q9NW68 430 aaPredicted RBP8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 MAPK8IP1Q9UQF2 711 aa8.57□□□□□ -1.04
COL6A4P2-204ENST00000509090 YARSP54577 528 aaKnown RBP8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 CLCQ05315 142 aa8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 RAD51AP2Q09MP3 1159 aa8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 CDH24Q86UP0 819 aa8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P2-204ENST00000509090 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 ZNF165P49910 485 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 C22orf34Q6ZV56 151 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 DNAJB8Q8NHS0 232 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 CYB5D2Q8WUJ1 264 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 TNKS2Q9H2K2 1166 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 CCDC39Q9UFE4 941 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
COL6A4P2-204ENST00000509090 CEACAM5P06731 702 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 MCM4P33991 863 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 PAK2Q13177 524 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 GK5Q6ZS86 529 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 TGIF2Q9GZN2 237 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 KLHL3Q9UH77 587 aa8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
COL6A4P2-204ENST00000509090 WNT11O96014 354 aa8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 ZNF865P0CJ78 1059 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 MLECQ14165 292 aa8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 ZNF746Q6NUN9 644 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 SNX11Q9Y5W9 270 aa8.53□□□□□ -1.04
COL6A4P2-204ENST00000509090 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 PRR33A8MZF0 331 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 TCF3P15923 654 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 CYP7A1P22680 504 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 SPACA3Q8IXA5 215 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.05
COL6A4P2-204ENST00000509090 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms