RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 GPR108Q9NPR9 543 aa12.28□□□□□ -0.44
SH3D21-206ENST00000508854 ZKSCAN1P17029 563 aaPredicted RBP12.27□□□□□ -0.45
SH3D21-206ENST00000508854 CYP2B6P20813 491 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 RGS2P41220 211 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 MCAMP43121 646 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 TGFBRAP1Q8WUH2 860 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 TRIB2Q92519 343 aa12.27□□□□□ -0.45
SH3D21-206ENST00000508854 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
SH3D21-206ENST00000508854 AATFQ9NY61 560 aaKnown RBP eCLIP12.27□□□□□ -0.45
SH3D21-206ENST00000508854 SOX1O00570 391 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 CCNA1P78396 465 aa12.26□□□□□ -0.45
SH3D21-206ENST00000508854 OS9Q13438 667 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 TMED8Q6PL24 325 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
SH3D21-206ENST00000508854 PI16Q6UXB8 463 aa12.26□□□□□ -0.45
SH3D21-206ENST00000508854 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
SH3D21-206ENST00000508854 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
SH3D21-206ENST00000508854 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 ZMYND8Q9ULU4 1186 aaPredicted RBP12.26□□□□□ -0.45
SH3D21-206ENST00000508854 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
SH3D21-206ENST00000508854 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 ERVK-24P63145 666 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 TRIM32Q13049 653 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 PLEKHH3Q7Z736 793 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 MAPKAPK5Q8IW41 473 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 DEFB123Q8N688 67 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
SH3D21-206ENST00000508854 RBPJLQ9UBG7 517 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 ZBTB21Q9ULJ3 1066 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 FLT1P17948 1338 aa12.25□□□□□ -0.45
SH3D21-206ENST00000508854 PNMA6EA0A0J9YXQ4 647 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 MSCO60682 206 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 MAGEA10P43363 369 aaPredicted RBP12.24□□□□□ -0.45
SH3D21-206ENST00000508854 USP14P54578 494 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 CACNB2Q08289 660 aaPredicted RBP12.24□□□□□ -0.45
SH3D21-206ENST00000508854 TNNI3KQ59H18 835 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 MFSD14CQ5VZR4 134 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 GPR142Q7Z601 462 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 ALPK3Q96L96 1907 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 APBA2Q99767 749 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 FPGT-TNNI3KV9GXZ4 949 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 COL6A3P12111 3177 aa12.24□□□□□ -0.45
SH3D21-206ENST00000508854 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
SH3D21-206ENST00000508854 LAMA3Q16787 3333 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 A0A0C4DFX4 3053 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 TRIM27P14373 513 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 SYN1P17600 705 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 MORN1Q5T089 497 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 USP6NLQ92738 828 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
SH3D21-206ENST00000508854 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
SH3D21-206ENST00000508854 FEZ1Q99689 392 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 SNRKQ9NRH2 765 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 STXBP5LQ9Y2K9 1186 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.23□□□□□ -0.45
SH3D21-206ENST00000508854 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
SH3D21-206ENST00000508854 GDF11O95390 407 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 CYP2E1P05181 493 aaPredicted RBP12.22□□□□□ -0.45
SH3D21-206ENST00000508854 COL6A1P12109 1028 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 CYP7A1P22680 504 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 USP5P45974 858 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 Q3C1V9 767 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 DNAJC18Q9H819 358 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 IVNS1ABPQ9Y6Y0 642 aa12.22□□□□□ -0.45
SH3D21-206ENST00000508854 PFASO15067 1338 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 SURF6O75683 361 aaKnown RBP12.21□□□□□ -0.45
SH3D21-206ENST00000508854 GH2P01242 217 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 ATP8B2P98198 1209 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 POLA2Q14181 598 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 LHX8Q68G74 356 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 TATDN1Q6P1N9 297 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 SSH3Q8TE77 659 aa12.21□□□□□ -0.45
SH3D21-206ENST00000508854 LBHD1Q9BQE6 289 aaPredicted RBP12.21□□□□□ -0.45
SH3D21-206ENST00000508854 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms