RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 GDF11O95390 407 aa12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 GCLCP48506 637 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 PRKCZQ05513 592 aa12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 SLC9C2Q5TAH2 1124 aa12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
UBE2D3-227ENST00000508818 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 USP17L10C9JJH3 530 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 GOLIM4O00461 696 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 ADCY3O60266 1144 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 BACE1P56817 501 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 MTMR2Q13614 643 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 PDE3AQ14432 1141 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 CRNKL1Q9BZJ0 848 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 SERPINB13Q9UIV8 391 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
UBE2D3-227ENST00000508818 FLT3LGP49771 235 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 MTFR1Q15390 333 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 SIRT2Q8IXJ6 389 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 FEZ1Q99689 392 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 GABRQQ9UN88 632 aa12.22□□□□□ -0.45
UBE2D3-227ENST00000508818 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 HAX1O00165 279 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 GH2P01242 217 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 CCL5P13501 91 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 PDE6AP16499 860 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.21□□□□□ -0.459e-7■■□□□ 13.5
UBE2D3-227ENST00000508818 EHD4Q9H223 541 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 BOLA2Q9H3K6 86 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 DNAJC18Q9H819 358 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 PAG1Q9NWQ8 432 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 MCM9Q9NXL9 1143 aa12.21□□□□□ -0.45
UBE2D3-227ENST00000508818 ZSWIM8A7E2V4 1837 aa12.21□□□□□ -0.46
UBE2D3-227ENST00000508818 GJB1P08034 283 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 JAG1P78504 1218 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 ABCB5Q2M3G0 1257 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 P2RX7Q99572 595 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 LRRCC1Q9C099 1032 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 MYO5AQ9Y4I1 1855 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
UBE2D3-227ENST00000508818 ELNP15502 786 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 ATP5JP18859 108 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 USP14P54578 494 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 IRF5Q13568 498 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 C20orf194Q5TEA3 1177 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 TATDN1Q6P1N9 297 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
UBE2D3-227ENST00000508818 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 PTPRFP10586 1907 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 MPHOSPH10O00566 681 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 INHAP05111 366 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 GJA8P48165 433 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 HERVK_113P62684 666 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 GTF3C2Q8WUA4 911 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 DPF3Q92784 378 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 EDC3Q96F86 508 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 HAUS7Q99871 368 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
UBE2D3-227ENST00000508818 USP17L15C9J2P7 530 aa12.17□□□□□ -0.46
UBE2D3-227ENST00000508818 USP17L13C9JLJ4 530 aa12.17□□□□□ -0.46
UBE2D3-227ENST00000508818 USP17L11C9JVI0 530 aa12.17□□□□□ -0.46
UBE2D3-227ENST00000508818 USP17L18D6R9N7 530 aa12.17□□□□□ -0.46
UBE2D3-227ENST00000508818 USP17L22D6RA61 530 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms