RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 PCDHB14Q9Y5E9 798 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
CHD1-205ENST00000508756 NKD1Q969G9 470 aa11.71□□□□□ -0.53
CHD1-205ENST00000508756 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.53
CHD1-205ENST00000508756 SLITRK5O94991 958 aa11.7□□□□□ -0.54
CHD1-205ENST00000508756 CST3P01034 146 aaPredicted RBP11.7□□□□□ -0.54
CHD1-205ENST00000508756 PAK2Q13177 524 aa11.7□□□□□ -0.54
CHD1-205ENST00000508756 CPSF6Q16630 551 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHD1-205ENST00000508756 CYP27C1Q4G0S4 372 aa11.7□□□□□ -0.54
CHD1-205ENST00000508756 MCATQ8IVS2 390 aaKnown RBP11.7□□□□□ -0.54
CHD1-205ENST00000508756 MIPEPQ99797 713 aa11.7□□□□□ -0.54
CHD1-205ENST00000508756 UPK3BL1B0FP48 263 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 UPK3BL2E5RIL1 263 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 DNAJA2O60884 412 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 MCM4P33991 863 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 TMEM201Q5SNT2 666 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 SLC6A19Q695T7 634 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 SLITRK4Q8IW52 837 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 KLHL3Q9UH77 587 aa11.69□□□□□ -0.54
CHD1-205ENST00000508756 SSTR4P31391 388 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 CLCQ05315 142 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 GK5Q6ZS86 529 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 FAM13CQ8NE31 585 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 ACBD3Q9H3P7 528 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 U3KQE9 123 aa11.68□□□□□ -0.54
CHD1-205ENST00000508756 CYP26A1O43174 497 aa11.67□□□□□ -0.54
CHD1-205ENST00000508756 MED26O95402 600 aa11.67□□□□□ -0.54
CHD1-205ENST00000508756 FOSL1P15407 271 aa11.67□□□□□ -0.54
CHD1-205ENST00000508756 ERCC5P28715 1186 aaPredicted RBP11.67□□□□□ -0.54
CHD1-205ENST00000508756 FAM181AQ8N9Y4 354 aa11.67□□□□□ -0.54
CHD1-205ENST00000508756 MFSD2AQ8NA29 543 aa11.67□□□□□ -0.54
CHD1-205ENST00000508756 COBLO75128 1261 aa11.66□□□□□ -0.54
CHD1-205ENST00000508756 EOMESO95936 686 aa11.66□□□□□ -0.54
CHD1-205ENST00000508756 RIN3Q8TB24 985 aa11.66□□□□□ -0.54
CHD1-205ENST00000508756 CCSER2Q9H7U1 834 aa11.66□□□□□ -0.54
CHD1-205ENST00000508756 IGSF5Q9NSI5 407 aa11.66□□□□□ -0.54
CHD1-205ENST00000508756 CHURC1-FNTBB4DL54 471 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 RBAK-RBAKDNI3L0D1 243 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 GRIK1P39086 918 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 TNNI2P48788 182 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 LETMD1Q6P1Q0 360 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 FAM214BQ7L5A3 538 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
CHD1-205ENST00000508756 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
CHD1-205ENST00000508756 SCO2A0A1W2PP80 73 aa11.64□□□□□ -0.55
CHD1-205ENST00000508756 ATE1O95260 518 aa11.64□□□□□ -0.55
CHD1-205ENST00000508756 CD97P48960 835 aa11.64□□□□□ -0.55
CHD1-205ENST00000508756 ZNF165P49910 485 aa11.64□□□□□ -0.55
CHD1-205ENST00000508756 REXO1Q8N1G1 1221 aaKnown RBP11.64□□□□□ -0.55
CHD1-205ENST00000508756 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
CHD1-205ENST00000508756 YARSP54577 528 aaKnown RBP11.63□□□□□ -0.55
CHD1-205ENST00000508756 GPRASP2Q96D09 838 aa11.63□□□□□ -0.55
CHD1-205ENST00000508756 ZC3H7BQ9UGR2 993 aaKnown RBP11.63□□□□□ -0.55
CHD1-205ENST00000508756 MSMPQ1L6U9 139 aa11.62□□□□□ -0.55
CHD1-205ENST00000508756 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
CHD1-205ENST00000508756 CDH24Q86UP0 819 aa11.62□□□□□ -0.55
CHD1-205ENST00000508756 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
CHD1-205ENST00000508756 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
CHD1-205ENST00000508756 TPX2Q9ULW0 747 aaKnown RBP11.62□□□□□ -0.55
CHD1-205ENST00000508756 SLC22A31A6NKX4 558 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 GJA8P48165 433 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 LRP8Q14114 963 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 OVOS1Q6IE37 1185 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 PRDM5Q9NQX1 630 aaPredicted RBP11.61□□□□□ -0.55
CHD1-205ENST00000508756 GINM1Q9NU53 330 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 INPP5FQ9Y2H2 1132 aa11.61□□□□□ -0.55
CHD1-205ENST00000508756 OXCT1P55809 520 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 MLECQ14165 292 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 DNAJB8Q8NHS0 232 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 GMIPQ9P107 970 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 PPT2Q9UMR5 302 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 EFR3BQ9Y2G0 817 aa11.6□□□□□ -0.55
CHD1-205ENST00000508756 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
CHD1-205ENST00000508756 ITIH2P19823 946 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 PLD6Q8N2A8 252 aaKnown RBP11.59□□□□□ -0.55
CHD1-205ENST00000508756 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 PPP1R13LQ8WUF5 828 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 PCMTD2Q9NV79 361 aa11.59□□□□□ -0.55
CHD1-205ENST00000508756 HYAL3O43820 417 aaPredicted RBP11.58□□□□□ -0.56
CHD1-205ENST00000508756 SPINK2P20155 84 aa11.58□□□□□ -0.56
CHD1-205ENST00000508756 BAHD1Q8TBE0 780 aaPredicted RBP11.58□□□□□ -0.56
CHD1-205ENST00000508756 FERD3LQ96RJ6 166 aa11.58□□□□□ -0.56
CHD1-205ENST00000508756 KIF2CQ99661 725 aa11.58□□□□□ -0.56
CHD1-205ENST00000508756 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
CHD1-205ENST00000508756 MAPK8IP1Q9UQF2 711 aa11.58□□□□□ -0.56
CHD1-205ENST00000508756 PRR33A8MZF0 331 aa11.57□□□□□ -0.56
CHD1-205ENST00000508756 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD1-205ENST00000508756 ARTNQ5T4W7 220 aa11.57□□□□□ -0.56
CHD1-205ENST00000508756 CCDC81Q6ZN84 652 aa11.57□□□□□ -0.56
CHD1-205ENST00000508756 PHACTR4Q8IZ21 702 aa11.57□□□□□ -0.56
CHD1-205ENST00000508756 SFRP5Q5T4F7 317 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 FBXW10Q5XX13 1052 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms