RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 HERC5Q9UII4 1024 aaKnown RBP11.64□□□□□ -0.55
NEDD9-211ENST00000508546 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 LDHCP07864 332 aa11.63□□□□□ -0.55
NEDD9-211ENST00000508546 TIMM10P62072 90 aa11.63□□□□□ -0.55
NEDD9-211ENST00000508546 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-211ENST00000508546 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
NEDD9-211ENST00000508546 SHHQ15465 462 aa11.63□□□□□ -0.55
NEDD9-211ENST00000508546 USP6NLQ92738 828 aa11.63□□□□□ -0.55
NEDD9-211ENST00000508546 UHRF1Q96T88 793 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-211ENST00000508546 LBHD1Q9BQE6 289 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-211ENST00000508546 PA2G4Q9UQ80 394 aaKnown RBP11.63□□□□□ -0.55
NEDD9-211ENST00000508546 MYO5AQ9Y4I1 1855 aaKnown RBP11.62□□□□□ -0.55
NEDD9-211ENST00000508546 ASNSP08243 561 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 MAPK4P31152 587 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 BACE1P56817 501 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 HERVK_113P62684 666 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 GSTO1P78417 241 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
NEDD9-211ENST00000508546 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-211ENST00000508546 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
NEDD9-211ENST00000508546 ALDH1L2Q3SY69 923 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 LHX8Q68G74 356 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 GPRC5AQ8NFJ5 357 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
NEDD9-211ENST00000508546 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 AKAP2Q9Y2D5 859 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 HCN4Q9Y3Q4 1203 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 RLFQ13129 1914 aa11.62□□□□□ -0.55
NEDD9-211ENST00000508546 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-211ENST00000508546 MTMR2Q13614 643 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-211ENST00000508546 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
NEDD9-211ENST00000508546 NECAB3Q96P71 396 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-211ENST00000508546 GINM1Q9NU53 330 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 TMOD4Q9NZQ9 345 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
NEDD9-211ENST00000508546 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-211ENST00000508546 MYH1P12882 1939 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 E9PSI1 815 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 ANP32CO43423 234 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 CCND3P30281 292 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-211ENST00000508546 RGS2P41220 211 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 ERVK-24P63145 666 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 GRIN2CQ14957 1233 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 MORN1Q5T089 497 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
NEDD9-211ENST00000508546 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 ASB2Q96Q27 587 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 APBA2Q99767 749 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
NEDD9-211ENST00000508546 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 THEGQ9P2T0 379 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 RBPJLQ9UBG7 517 aa11.6□□□□□ -0.55
NEDD9-211ENST00000508546 TCF20Q9UGU0 1960 aaKnown RBP11.59□□□□□ -0.55
NEDD9-211ENST00000508546 USP17L10C9JJH3 530 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 CCL14Q16627 93 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 Q3C1V9 767 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 ATXN2LQ8WWM7 1075 aaKnown RBP11.59□□□□□ -0.55
NEDD9-211ENST00000508546 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 PORCNQ9H237 461 aa11.59□□□□□ -0.55
NEDD9-211ENST00000508546 PEX10O60683 326 aa11.58□□□□□ -0.56
NEDD9-211ENST00000508546 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-211ENST00000508546 TFCP2Q12800 502 aa11.58□□□□□ -0.56
NEDD9-211ENST00000508546 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
NEDD9-211ENST00000508546 ALYREFQ86V81 257 aaKnown RBP11.58□□□□□ -0.56
NEDD9-211ENST00000508546 FOXP4Q8IVH2 680 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-211ENST00000508546 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
NEDD9-211ENST00000508546 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
NEDD9-211ENST00000508546 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
NEDD9-211ENST00000508546 MSCO60682 206 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 PLCG2P16885 1265 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 JAG1P78504 1218 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 SLFN5Q08AF3 891 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 MAP2K5Q13163 448 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 MTX1Q13505 466 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-211ENST00000508546 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
NEDD9-211ENST00000508546 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
NEDD9-211ENST00000508546 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 GLRX3O76003 335 aaKnown RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 BAG3O95817 575 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 MCAMP43121 646 aa11.56□□□□□ -0.56
NEDD9-211ENST00000508546 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-211ENST00000508546 PPP4CP60510 307 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms