RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 PRDM1O75626 825 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 SPATA1Q5VX52 437 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 EHBP1Q8NDI1 1231 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 GOLGA6CA6NDK9 693 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 STARD3NLO95772 234 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 GOLGA6DP0CG33 693 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 GOLGA6AQ9NYA3 693 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 RAD21O60216 631 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 PDE4BQ07343 736 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 PHKG2P15735 406 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 KCNJ6P48051 423 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 KRT83P78385 493 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 MAP3K9P80192 1104 aa16.53■□□□□ 0.24
ATP2C1-214ENST00000508532 DIP2CQ9Y2E4 1556 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 NCAPHQ15003 741 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 RESP18Q5W5W9 173 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 MRPL44Q9H9J2 332 aaKnown RBP16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 ITGA6P23229 1130 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 TUBB2AQ13885 445 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 WHAMMP3Q1A5X7 153 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 CCDC178Q5BJE1 867 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 ESR2Q92731 530 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 CCDC42Q96M95 316 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 TUBB2BQ9BVA1 445 aa16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 BCCIPQ9P287 314 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.24
ATP2C1-214ENST00000508532 CYP7A1P22680 504 aa16.52■□□□□ 0.23
ATP2C1-214ENST00000508532 HLTFQ14527 1009 aaKnown RBP eCLIP16.52■□□□□ 0.23
ATP2C1-214ENST00000508532 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.23
ATP2C1-214ENST00000508532 PAK1Q13153 545 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 HSF2BPO75031 334 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 RNF40O75150 1001 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 LIG3P49916 1009 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.232e-20■■■■■ 71.1
ATP2C1-214ENST00000508532 TTC19Q6DKK2 380 aaPredicted RBP16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 SAR1BQ9Y6B6 198 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 GOLGA6BA6NDN3 693 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 ERCC3P19447 782 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 CDC27P30260 824 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 ZHX3Q9H4I2 956 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 PSMA7O14818 248 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
ATP2C1-214ENST00000508532 MAATS1Q7Z4T9 603 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 NELFBQ8WX92 580 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 ATRIPQ8WXE1 791 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 ATP2C2O75185 946 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 SASH3O75995 380 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 BMP15O95972 392 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 PDE6AP16499 860 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 CYB5R4Q7L1T6 521 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 TRIML1Q8N9V2 468 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 ALS2CR12Q96Q35 445 aa16.5■□□□□ 0.23
ATP2C1-214ENST00000508532 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 TRIM65Q6PJ69 517 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 N4BP1O75113 896 aaKnown RBP16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 TACC1O75410 805 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 SCARF1Q14162 830 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 CCT5P48643 541 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 TBC1D10CQ8IV04 446 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 VSNL1P62760 191 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
ATP2C1-214ENST00000508532 NDUFAB1O14561 156 aa16.48■□□□□ 0.23
ATP2C1-214ENST00000508532 ERCC5P28715 1186 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-214ENST00000508532 E2F4Q16254 413 aa16.48■□□□□ 0.23
ATP2C1-214ENST00000508532 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
ATP2C1-214ENST00000508532 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms