RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 IGF2BP3O00425 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
DHFR-204ENST00000508282 GREM1O60565 184 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 VAMP1P23763 118 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 ZNF76P36508 570 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 MPP2Q14168 576 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 VSIG10LQ86VR7 867 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 MCATQ8IVS2 390 aaKnown RBP8.67□□□□□ -1.02
DHFR-204ENST00000508282 XAGE3Q8WTP9 111 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 ZNF296Q8WUU4 475 aaPredicted RBP8.67□□□□□ -1.02
DHFR-204ENST00000508282 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 CNTNAP4Q9C0A0 1308 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 GTF2IRD1Q9UHL9 959 aa8.67□□□□□ -1.02
DHFR-204ENST00000508282 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
DHFR-204ENST00000508282 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
DHFR-204ENST00000508282 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 TLR3O15455 904 aaKnown RBP8.66□□□□□ -1.02
DHFR-204ENST00000508282 GRIN3BO60391 1043 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 CEACAM5P06731 702 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 REC114Q7Z4M0 266 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 WFDC3Q8IUB2 231 aa8.66□□□□□ -1.02
DHFR-204ENST00000508282 PRDM5Q9NQX1 630 aaPredicted RBP8.66□□□□□ -1.02
DHFR-204ENST00000508282 SUPT16HQ9Y5B9 1047 aaKnown RBP8.66□□□□□ -1.02
DHFR-204ENST00000508282 UNCXA6NJT0 531 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 PLCG1P19174 1290 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 ITIH2P19823 946 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 CRKP46108 304 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 IFI16Q16666 785 aaKnown RBP8.65□□□□□ -1.02
DHFR-204ENST00000508282 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 ARHGAP27Q6ZUM4 889 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 BCL7CQ8WUZ0 217 aaPredicted RBP8.65□□□□□ -1.02
DHFR-204ENST00000508282 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 METTL5Q9NRN9 209 aaKnown RBP8.65□□□□□ -1.02
DHFR-204ENST00000508282 MAPK8IP1Q9UQF2 711 aa8.65□□□□□ -1.02
DHFR-204ENST00000508282 HTR3BO95264 441 aa8.64□□□□□ -1.03
DHFR-204ENST00000508282 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
DHFR-204ENST00000508282 TNKS2Q9H2K2 1166 aa8.64□□□□□ -1.03
DHFR-204ENST00000508282 ROBO2Q9HCK4 1378 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 UPK3BL1B0FP48 263 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 UPK3BL2E5RIL1 263 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 BNIP3Q12983 259 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 NKPD1Q17RQ9 610 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
DHFR-204ENST00000508282 SPRED2Q7Z698 418 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 SPACA3Q8IXA5 215 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 FLCNQ8NFG4 579 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
DHFR-204ENST00000508282 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 KIAA1522Q9P206 1035 aaPredicted RBP8.63□□□□□ -1.03
DHFR-204ENST00000508282 REV1Q9UBZ9 1251 aa8.63□□□□□ -1.03
DHFR-204ENST00000508282 TPX2Q9ULW0 747 aaKnown RBP8.63□□□□□ -1.03
DHFR-204ENST00000508282 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 ZNF394Q53GI3 561 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 ZNF574Q6ZN55 896 aaPredicted RBP8.62□□□□□ -1.03
DHFR-204ENST00000508282 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 FAM13CQ8NE31 585 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
DHFR-204ENST00000508282 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
DHFR-204ENST00000508282 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 GNAT3A8MTJ3 354 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 DNAJA2O60884 412 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 CD96P40200 585 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 PRKCQQ04759 706 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 C22orf34Q6ZV56 151 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 USP48Q86UV5 1035 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 ABI1Q8IZP0 508 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 STK11IPQ8N1F8 1099 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 DNAJB8Q8NHS0 232 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 PPP1R13LQ8WUF5 828 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 RNF34Q969K3 372 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 VAV3Q9UKW4 847 aa8.61□□□□□ -1.03
DHFR-204ENST00000508282 SCAMP3O14828 347 aaKnown RBP8.6□□□□□ -1.03
DHFR-204ENST00000508282 ZNF865P0CJ78 1059 aaPredicted RBP8.6□□□□□ -1.03
DHFR-204ENST00000508282 AOC3Q16853 763 aa8.6□□□□□ -1.03
DHFR-204ENST00000508282 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
DHFR-204ENST00000508282 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
DHFR-204ENST00000508282 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
DHFR-204ENST00000508282 HRASLS5Q96KN8 279 aa8.6□□□□□ -1.03
DHFR-204ENST00000508282 PCDHB14Q9Y5E9 798 aa8.6□□□□□ -1.03
DHFR-204ENST00000508282 PCDHGB7Q9Y5F8 929 aa8.6□□□□□ -1.03
DHFR-204ENST00000508282 CHURC1-FNTBB4DL54 471 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 CD8BP10966 210 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
DHFR-204ENST00000508282 APOBRQ0VD83 1088 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 SEZ6Q53EL9 994 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 METTL16Q86W50 562 aaKnown RBP8.59□□□□□ -1.03
DHFR-204ENST00000508282 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 SLFN12Q8IYM2 578 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 CYB5D2Q8WUJ1 264 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 SPON2Q9BUD6 331 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 NT5C1AQ9BXI3 368 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 KLHL3Q9UH77 587 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 CEP131Q9UPN4 1083 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 SNX11Q9Y5W9 270 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms