RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 TTC41PQ6P2S7 1318 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 GH2P01242 217 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 ASNSP08243 561 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 JAG1P78504 1218 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 EVX2Q03828 476 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 MTMR2Q13614 643 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 MOGSQ13724 837 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 KIF22Q14807 665 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 GPAT2Q6NUI2 795 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 FSD1Q9BTV5 496 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
DDX41-209ENST00000508279 ZBTB21Q9ULJ3 1066 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
DDX41-209ENST00000508279 MGAMO43451 1857 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 CYP2D7A0A087X1C5 515 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
DDX41-209ENST00000508279 IGHDP01880 384 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 CAP1Q01518 475 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 AAMPQ13685 434 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 ZYXQ15942 572 aaKnown RBP11.29□□□□□ -0.6
DDX41-209ENST00000508279 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 TREML2Q5T2D2 321 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
DDX41-209ENST00000508279 STK11IPQ8N1F8 1099 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
DDX41-209ENST00000508279 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 FEZ1Q99689 392 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
DDX41-209ENST00000508279 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 APPP05067 770 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 SOX10P56693 466 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
DDX41-209ENST00000508279 ARHGEF6Q15052 776 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 LRRFIP1Q32MZ4 808 aaKnown RBP11.28□□□□□ -0.6
DDX41-209ENST00000508279 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
DDX41-209ENST00000508279 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 APPBP2Q92624 585 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 OSBP2Q969R2 916 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 EHD4Q9H223 541 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
DDX41-209ENST00000508279 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 USP17L12C9JPN9 530 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 USP17L21D6R901 530 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 SMIM22K7EJ46 135 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 M0R2C6 588 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
DDX41-209ENST00000508279 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
DDX41-209ENST00000508279 SHMT1P34896 483 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 PSMC4P43686 418 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 PDE1AP54750 535 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
DDX41-209ENST00000508279 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 PROCA1Q8NCQ7 364 aaPredicted RBP11.27□□□□□ -0.61
DDX41-209ENST00000508279 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
DDX41-209ENST00000508279 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
DDX41-209ENST00000508279 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 GPAA1O43292 621 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 MYCP01106 439 aaPredicted RBP11.26□□□□□ -0.61
DDX41-209ENST00000508279 OSBPP22059 807 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 BACE1P56817 501 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 IRX3P78415 501 aaPredicted RBP11.26□□□□□ -0.61
DDX41-209ENST00000508279 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDX41-209ENST00000508279 SEPT2Q15019 361 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
DDX41-209ENST00000508279 WDR18Q9BV38 432 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
DDX41-209ENST00000508279 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 TDO2P48775 406 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 GABPAQ06546 454 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 CHD1LQ86WJ1 897 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 SMC5Q8IY18 1101 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 ACER1Q8TDN7 264 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
DDX41-209ENST00000508279 SWAP70Q9UH65 585 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 SLC45A1Q9Y2W3 748 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms