RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 TNNI3KQ59H18 835 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 GORABQ5T7V8 394 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 ERICH6Q7L0X2 663 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 ZNF384Q8TF68 577 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 WRNIP1Q96S55 665 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 FAM117AQ9C073 453 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 SNCAIPQ9Y6H5 919 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 FPGT-TNNI3KV9GXZ4 949 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 RFX7Q2KHR2 1363 aa9.77□□□□□ -0.84
UBE2D3-222ENST00000508238 TK2O00142 265 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 LDHCP07864 332 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 DNAJB2P25686 324 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 MCAMP43121 646 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 MECOMQ03112 1051 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 PPATQ06203 517 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 CEP85Q6P2H3 762 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 PANK1Q8TE04 598 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 ZKSCAN4Q969J2 545 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 NSUN4Q96CB9 384 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 ZCCHC17Q9NP64 241 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 MROH7-TTC4A0A0A0MT08 1334 aa9.77□□□□□ -0.85
UBE2D3-222ENST00000508238 ATRNL1Q5VV63 1379 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 CEP290O15078 2479 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 CETPP11597 493 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 BTDP43251 543 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 RGS3P49796 1198 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 RHBDL3P58872 404 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 GSTO1P78417 241 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 TCP10Q12799 353 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 CRHR2Q13324 411 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 PPIL2Q13356 520 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 SNAPC2Q13487 334 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 NOL9Q5SY16 702 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 PI16Q6UXB8 463 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 TBC1D9Q6ZT07 1266 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 MIGA2Q7L4E1 593 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 ZFPM1Q8IX07 1006 aa9.76□□□□□ -0.85
UBE2D3-222ENST00000508238 CCL15-CCL14A0A0B4J2E2 113 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 INPP5BP32019 993 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 CCL15Q16663 113 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 FBXO46Q6PJ61 603 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 ADGRD1Q6QNK2 874 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 ERC1Q8IUD2 1116 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 RPAP2Q8IXW5 612 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 EAF2Q96CJ1 260 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 DBNDD2Q9BQY9 259 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 ZBTB40Q9NUA8 1239 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 DAXXQ9UER7 740 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 DDX19BQ9UMR2 479 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 KCNH4Q9UQ05 1017 aa9.75□□□□□ -0.85
UBE2D3-222ENST00000508238 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 CXCL11O14625 94 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 PPP4CP60510 307 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 HSP90AB4PQ58FF6 505 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 TMED8Q6PL24 325 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 ERO1AQ96HE7 468 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 CHMP4BQ9H444 224 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 ZFYVE28Q9HCC9 887 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 DDX4Q9NQI0 724 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 RAI14Q9P0K7 980 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 LRP2BPQ9P2M1 347 aa9.74□□□□□ -0.85
UBE2D3-222ENST00000508238 COL2A1P02458 1487 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 DDTLA6NHG4 134 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 BTBD19C9JJ37 291 aa9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 CTNND1O60716 968 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 CYP2E1P05181 493 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 SP3Q02447 781 aa9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 PDE3AQ14432 1141 aa9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 TAF1CQ15572 869 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
UBE2D3-222ENST00000508238 TLR2O60603 784 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 HMMRO75330 724 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 BAG3O95817 575 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 MLLT1Q03111 559 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 MOGSQ13724 837 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 ANKRD23Q86SG2 305 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 ZSCAN29Q8IWY8 852 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 SIRT2Q8IXJ6 389 aa9.72□□□□□ -0.85
UBE2D3-222ENST00000508238 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms