RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 KLRK1P26718 216 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 PKN1Q16512 942 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 KCND1Q9NSA2 647 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 CICQ96RK0 1608 aaPredicted RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 LAMB2P55268 1798 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 PLEKHA8P1O95397 391 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 POSTNQ15063 836 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 ZSCAN10Q96SZ4 725 aaPredicted RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
LIN54-207ENST00000508171 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
LIN54-207ENST00000508171 RREB1Q92766 1687 aa12.54□□□□□ -0.4
LIN54-207ENST00000508171 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
LIN54-207ENST00000508171 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 CAVIN4Q5BKX8 364 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
LIN54-207ENST00000508171 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 USP17L21D6R901 530 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 WNT7AO00755 349 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
LIN54-207ENST00000508171 FUT2Q10981 343 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 SF3B3Q15393 1217 aaKnown RBP12.53□□□□□ -0.4
LIN54-207ENST00000508171 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
LIN54-207ENST00000508171 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
LIN54-207ENST00000508171 SRPRBQ9Y5M8 271 aaKnown RBP12.53□□□□□ -0.4
LIN54-207ENST00000508171 A0A1B0GUL6 1792 aa12.52□□□□□ -0.4
LIN54-207ENST00000508171 NMT2O60551 498 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 PTF1AQ7RTS3 328 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 INTS13Q9NVM9 706 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 RCAN1P53805 252 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
LIN54-207ENST00000508171 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 MED15Q96RN5 788 aa12.52□□□□□ -0.41
LIN54-207ENST00000508171 A0A087X0B3 334 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 TROAPQ12815 778 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 SYCP1Q15431 976 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 TFCP2L1Q9NZI6 479 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
LIN54-207ENST00000508171 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
LIN54-207ENST00000508171 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
LIN54-207ENST00000508171 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
LIN54-207ENST00000508171 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
LIN54-207ENST00000508171 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 PRPF3O43395 683 aaKnown RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 CASP1P29466 404 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 MECOMQ03112 1051 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 MORC3Q14149 939 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 SMARCE1Q969G3 411 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 NFE2L3Q9Y4A8 694 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 DUOX1Q9NRD9 1551 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
LIN54-207ENST00000508171 FBXO33Q7Z6M2 555 aa12.5□□□□□ -0.41
LIN54-207ENST00000508171 IQCA1Q86XH1 822 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms