RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
DDX41-208ENST00000507955 WNT7AO00755 349 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 DEXIO95424 95 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 PKN1Q16512 942 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 PDILTQ8N807 584 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
DDX41-208ENST00000507955 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
DDX41-208ENST00000507955 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 PPP6R2O75170 966 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDX41-208ENST00000507955 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 RESP18Q5W5W9 173 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 BRIP1Q9BX63 1249 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 CAVIN2O95810 425 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
DDX41-208ENST00000507955 TMTC2Q8N394 836 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 DYNLL2Q96FJ2 89 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
DDX41-208ENST00000507955 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
DDX41-208ENST00000507955 ATP1A3P13637 1013 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
DDX41-208ENST00000507955 TROAPQ12815 778 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
DDX41-208ENST00000507955 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 SCN7AQ01118 1682 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 FUT2Q10981 343 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 SARM1Q6SZW1 724 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.68■□□□□ 0.26
DDX41-208ENST00000507955 WASF1Q92558 559 aa16.68■□□□□ 0.26
DDX41-208ENST00000507955 CCDC196A0A1B0GTZ2 297 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 NLRP12P59046 1061 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 IQCA1Q86XH1 822 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 DZIP1Q86YF9 867 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 TNRC6CQ9HCJ0 1690 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 NCAPHQ15003 741 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
DDX41-208ENST00000507955 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 IFNKQ9P0W0 207 aa16.67■□□□□ 0.26
DDX41-208ENST00000507955 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 SMC2O95347 1197 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 AKAP17AQ02040 695 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 CNBD1Q8NA66 436 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 GJD4Q96KN9 370 aaPredicted RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 XPO4Q9C0E2 1151 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 FBXO2Q9UK22 296 aaPredicted RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 PCDHA5Q9Y5H7 936 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 BMP6P22004 513 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 NID2Q14112 1375 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 IRS2Q9Y4H2 1338 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 CUTAO60888 179 aa16.66■□□□□ 0.26
DDX41-208ENST00000507955 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
DDX41-208ENST00000507955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
DDX41-208ENST00000507955 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 PDE4BQ07343 736 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 KRBA2Q6ZNG9 492 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 ANKRD7Q92527 254 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 HSD3B7Q9H2F3 369 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 CASP1P29466 404 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
DDX41-208ENST00000507955 CSRNP2Q9H175 543 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 SAP30BPQ9UHR5 308 aaKnown RBP16.65■□□□□ 0.26
DDX41-208ENST00000507955 SERTAD1Q9UHV2 236 aa16.65■□□□□ 0.26
DDX41-208ENST00000507955 SEMA3EO15041 775 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 FGRP09769 529 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
DDX41-208ENST00000507955 RILPL1Q5EBL4 403 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 CDC25BP30305 580 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 GPSM2P81274 684 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 GRAPQ13588 217 aa16.64■□□□□ 0.25
DDX41-208ENST00000507955 GRAPLQ8TC17 118 aaPredicted RBP16.64■□□□□ 0.25
DDX41-208ENST00000507955 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms