RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.55■□□□□ 0.88
RNF4-209ENST00000507784 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
RNF4-209ENST00000507784 ATRNL1Q5VV63 1379 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 SCN4AP35499 1836 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
RNF4-209ENST00000507784 WTAPQ15007 396 aa20.54■□□□□ 0.88
RNF4-209ENST00000507784 EAPPQ56P03 285 aaPredicted RBP20.54■□□□□ 0.88
RNF4-209ENST00000507784 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
RNF4-209ENST00000507784 DEFB129Q9H1M3 183 aa20.54■□□□□ 0.88
RNF4-209ENST00000507784 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
RNF4-209ENST00000507784 SHMT1P34896 483 aa20.53■□□□□ 0.88
RNF4-209ENST00000507784 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
RNF4-209ENST00000507784 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
RNF4-209ENST00000507784 ZSCAN10Q96SZ4 725 aaPredicted RBP20.53■□□□□ 0.88
RNF4-209ENST00000507784 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
RNF4-209ENST00000507784 TPCN1Q9ULQ1 816 aa20.53■□□□□ 0.88
RNF4-209ENST00000507784 ANGEL1Q9UNK9 670 aaKnown RBP20.53■□□□□ 0.88
RNF4-209ENST00000507784 WDR90Q96KV7 1748 aa20.53■□□□□ 0.88
RNF4-209ENST00000507784 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
RNF4-209ENST00000507784 NT5C2P49902 561 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 STK3Q13188 491 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 MIGA2Q7L4E1 593 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 CDAN1Q8IWY9 1227 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 CLEC11AQ9Y240 323 aa20.52■□□□□ 0.88
RNF4-209ENST00000507784 TNKSO95271 1327 aa20.52■□□□□ 0.87
RNF4-209ENST00000507784 NMT2O60551 498 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 AKR1B1P15121 316 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 CERKLQ49MI3 558 aaPredicted RBP20.51■□□□□ 0.87
RNF4-209ENST00000507784 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 MTA3Q9BTC8 594 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 HERC5Q9UII4 1024 aaKnown RBP20.51■□□□□ 0.87
RNF4-209ENST00000507784 PITPNM2Q9BZ72 1349 aa20.51■□□□□ 0.87
RNF4-209ENST00000507784 KLF18A0A0U1RQI7 1052 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 POTECB2RU33 542 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 LARGE1O95461 756 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 ME3Q16798 604 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
RNF4-209ENST00000507784 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 NEDD1Q8NHV4 660 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 CCDC17Q96LX7 622 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 LY9Q9HBG7 655 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 SH2B1Q9NRF2 756 aaPredicted RBP20.5■□□□□ 0.87
RNF4-209ENST00000507784 PGAP2Q9UHJ9 254 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
RNF4-209ENST00000507784 LIFRP42702 1097 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
RNF4-209ENST00000507784 METTL16Q86W50 562 aaKnown RBP20.49■□□□□ 0.87
RNF4-209ENST00000507784 RAB11FIP4Q86YS3 637 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 SULF1Q8IWU6 871 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 FBXL16Q8N461 479 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 TEPSINQ96N21 525 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 SLKQ9H2G2 1235 aaPredicted RBP20.49■□□□□ 0.87
RNF4-209ENST00000507784 BRPF3Q9ULD4 1205 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 PPP2R3BQ9Y5P8 575 aa20.49■□□□□ 0.87
RNF4-209ENST00000507784 TBC1D12O60347 775 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 GDF11O95390 407 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 SEC23AQ15436 765 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 TATDN1Q6P1N9 297 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
RNF4-209ENST00000507784 CCDC83Q8IWF9 413 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 ENAHQ8N8S7 591 aaPredicted RBP20.48■□□□□ 0.87
RNF4-209ENST00000507784 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
RNF4-209ENST00000507784 CABP5Q9NP86 173 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 IL17RBQ9NRM6 502 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 SLC12A7Q9Y666 1083 aa20.48■□□□□ 0.87
RNF4-209ENST00000507784 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
RNF4-209ENST00000507784 CCT2P78371 535 aaKnown RBP20.47■□□□□ 0.87
RNF4-209ENST00000507784 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
RNF4-209ENST00000507784 ZC3H15Q8WU90 426 aaKnown RBP20.47■□□□□ 0.87
RNF4-209ENST00000507784 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
RNF4-209ENST00000507784 ZNF274Q96GC6 653 aaPredicted RBP20.47■□□□□ 0.87
RNF4-209ENST00000507784 GOLGA8BA8MQT2 603 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 ADM5C9JUS6 153 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 PDIA3P30101 505 aaKnown RBP20.46■□□□□ 0.87
RNF4-209ENST00000507784 DCAF15Q66K64 600 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 KRT26Q7Z3Y9 468 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 KAT14Q9H8E8 782 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 STX8Q9UNK0 236 aa20.46■□□□□ 0.87
RNF4-209ENST00000507784 ZBTB43O43298 467 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 PFKFB2O60825 505 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 ATP2B2Q01814 1243 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 RRP1BQ14684 758 aaKnown RBP20.45■□□□□ 0.86
RNF4-209ENST00000507784 SUPT20HL1Q3ZLR7 823 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 CATIPQ7Z7H3 387 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 SGMS1Q86VZ5 419 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 DGKHQ86XP1 1220 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 CEP95Q96GE4 821 aa20.45■□□□□ 0.86
RNF4-209ENST00000507784 MYL10Q9BUA6 226 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms