RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ARPP21Q9UBL0 812 aaPredicted RBP23.8■■□□□ 1.4
SNX25-204ENST00000506896 CXCL11O14625 94 aa23.79■■□□□ 1.4
SNX25-204ENST00000506896 PLCD1P51178 756 aa23.79■■□□□ 1.4
SNX25-204ENST00000506896 MOGSQ13724 837 aa23.79■■□□□ 1.4
SNX25-204ENST00000506896 SEC62Q99442 399 aaKnown RBP23.79■■□□□ 1.4
SNX25-204ENST00000506896 NACAP1Q9BZK3 213 aa23.79■■□□□ 1.4
SNX25-204ENST00000506896 GINM1Q9NU53 330 aa23.79■■□□□ 1.4
SNX25-204ENST00000506896 GSG1L2A8MUP6 293 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 PATL2C9JE40 543 aaKnown RBP23.78■■□□□ 1.4
SNX25-204ENST00000506896 SDSP20132 328 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 MCMDC2Q4G0Z9 681 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 TATDN1Q6P1N9 297 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 TBC1D2Q9BYX2 928 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 AFG3L2Q9Y4W6 797 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 ZHX2Q9Y6X8 837 aa23.78■■□□□ 1.4
SNX25-204ENST00000506896 PTPRFP10586 1907 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 USP17L12C9JPN9 530 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 USP17L21D6R901 530 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 GSPT1P15170 499 aaKnown RBP23.77■■□□□ 1.4
SNX25-204ENST00000506896 RRP1BQ14684 758 aaKnown RBP23.77■■□□□ 1.4
SNX25-204ENST00000506896 TAF1CQ15572 869 aaPredicted RBP23.77■■□□□ 1.4
SNX25-204ENST00000506896 PKN2Q16513 984 aaKnown RBP23.77■■□□□ 1.4
SNX25-204ENST00000506896 C12orf60Q5U649 245 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 ZFYVE28Q9HCC9 887 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 SWAP70Q9UH65 585 aa23.77■■□□□ 1.4
SNX25-204ENST00000506896 APPP05067 770 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 ASNSP08243 561 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 GABPAQ06546 454 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 SBK1Q52WX2 424 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 CTR9Q6PD62 1173 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 FAM227BQ96M60 508 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 DIAPH3Q9NSV4 1193 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 PPP4R2Q9NY27 417 aa23.76■■□□□ 1.39
SNX25-204ENST00000506896 BAZ2AQ9UIF9 1905 aaKnown RBP23.76■■□□□ 1.39
SNX25-204ENST00000506896 ATAD5Q96QE3 1844 aa23.75■■□□□ 1.39
SNX25-204ENST00000506896 A0A0D9SFI3 127 aa23.75■■□□□ 1.39
SNX25-204ENST00000506896 TDO2P48775 406 aa23.75■■□□□ 1.39
SNX25-204ENST00000506896 MFAP1P55081 439 aaKnown RBP23.75■■□□□ 1.39
SNX25-204ENST00000506896 NMIQ13287 307 aaPredicted RBP23.75■■□□□ 1.39
SNX25-204ENST00000506896 ANKRD23Q86SG2 305 aa23.75■■□□□ 1.39
SNX25-204ENST00000506896 CYP2D6P10635 497 aa23.74■■□□□ 1.39
SNX25-204ENST00000506896 SP3Q02447 781 aa23.74■■□□□ 1.39
SNX25-204ENST00000506896 IFNL3Q8IZI9 196 aa23.74■■□□□ 1.39
SNX25-204ENST00000506896 A0A0G2JLL6 359 aaPredicted RBP23.73■■□□□ 1.39
SNX25-204ENST00000506896 CCDC85CA6NKD9 419 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 TLR2O60603 784 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 SHMT1P34896 483 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 CAP1Q01518 475 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 CERKLQ49MI3 558 aaPredicted RBP23.73■■□□□ 1.39
SNX25-204ENST00000506896 GPAT2Q6NUI2 795 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 CCDC129Q6ZRS4 1044 aa23.73■■□□□ 1.39
SNX25-204ENST00000506896 PRRT2Q7Z6L0 340 aaPredicted RBP23.73■■□□□ 1.39
SNX25-204ENST00000506896 EPB41L4AQ9HCS5 686 aaPredicted RBP23.73■■□□□ 1.39
SNX25-204ENST00000506896 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.73■■□□□ 1.39
SNX25-204ENST00000506896 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
SNX25-204ENST00000506896 ERO1AQ96HE7 468 aa23.72■■□□□ 1.39
SNX25-204ENST00000506896 NAPBQ9H115 298 aa23.72■■□□□ 1.39
SNX25-204ENST00000506896 AS3MTQ9HBK9 375 aa23.72■■□□□ 1.39
SNX25-204ENST00000506896 ZBTB21Q9ULJ3 1066 aa23.72■■□□□ 1.39
SNX25-204ENST00000506896 CCDC171Q6TFL3 1326 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 CYP2D7A0A087X1C5 515 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 PDHXO00330 501 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 GDF11O95390 407 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 C16orf86Q6ZW13 317 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 OTOP1Q7RTM1 612 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 CCDC84Q86UT8 332 aaPredicted RBP23.71■■□□□ 1.39
SNX25-204ENST00000506896 CD99L2Q8TCZ2 262 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 CABP5Q9NP86 173 aa23.71■■□□□ 1.39
SNX25-204ENST00000506896 ROBO3Q96MS0 1386 aa23.7■■□□□ 1.38
SNX25-204ENST00000506896 EVX2Q03828 476 aa23.7■■□□□ 1.38
SNX25-204ENST00000506896 ABCB5Q2M3G0 1257 aa23.7■■□□□ 1.38
SNX25-204ENST00000506896 FBXO46Q6PJ61 603 aaPredicted RBP23.7■■□□□ 1.38
SNX25-204ENST00000506896 CWC27Q6UX04 472 aaKnown RBP23.7■■□□□ 1.38
SNX25-204ENST00000506896 FASTKD5Q7L8L6 764 aaKnown RBP23.7■■□□□ 1.38
SNX25-204ENST00000506896 ZNF280CQ8ND82 737 aa23.7■■□□□ 1.38
SNX25-204ENST00000506896 DYNLL2Q96FJ2 89 aa23.7■■□□□ 1.38
SNX25-204ENST00000506896 MINDY4BA8MYZ0 360 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 GH2P01242 217 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 CDK8P49336 464 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 JAG1P78504 1218 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 ALX1Q15699 326 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 C17orf99Q6UX52 265 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 ZNF589Q86UQ0 364 aaPredicted RBP23.69■■□□□ 1.38
SNX25-204ENST00000506896 CCDC17Q96LX7 622 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 WDR18Q9BV38 432 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 ZNF287Q9HBT7 754 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 HPS5Q9UPZ3 1129 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 TRIM17Q9Y577 477 aa23.69■■□□□ 1.38
SNX25-204ENST00000506896 ADGRA2Q96PE1 1338 aa23.68■■□□□ 1.38
SNX25-204ENST00000506896 TRIM75PA6NK02 468 aa23.68■■□□□ 1.38
SNX25-204ENST00000506896 SLC3A2P08195 630 aaKnown RBP23.68■■□□□ 1.38
SNX25-204ENST00000506896 RUFY2Q8WXA3 655 aa23.68■■□□□ 1.38
SNX25-204ENST00000506896 HTTP42858 3142 aa23.68■■□□□ 1.38
SNX25-204ENST00000506896 ZMYM6O95789 1325 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 RAD50Q92878 1312 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 FOXP2O15409 715 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 HSPD1P10809 573 aaKnown RBP23.67■■□□□ 1.38
SNX25-204ENST00000506896 SPP2Q13103 211 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
SNX25-204ENST00000506896 VPS53Q5VIR6 699 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms