RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TTLL4Q14679 1199 aa5.14□□□□□ -1.59
TOPBP1-205ENST00000506779 TMEM132EQ6IEE7 984 aa5.14□□□□□ -1.59
TOPBP1-205ENST00000506779 FRMD5Q7Z6J6 570 aa5.14□□□□□ -1.59
TOPBP1-205ENST00000506779 DACT3Q96B18 629 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-205ENST00000506779 PI3P19957 117 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 AFF3P51826 1226 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 SP8Q8IXZ3 490 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 CCDC74AQ96AQ1 378 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 FAM129BQ96TA1 746 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 ARID3AQ99856 593 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 ZC3H12CQ9C0D7 883 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 ABCB6Q9NP58 842 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 TRAK1Q9UPV9 953 aa5.13□□□□□ -1.59
TOPBP1-205ENST00000506779 GNAT3A8MTJ3 354 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 SLPIP03973 132 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 SLFN14P0C7P3 912 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 HCLS1P14317 486 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 LIG1P18858 919 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 ZNF157P51786 506 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 ARHGAP4P98171 946 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 ID3Q02535 119 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 PTPN12Q05209 780 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 RPS26P11Q5JNZ5 115 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 PRPF40BQ6NWY9 871 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 IRF2BP1Q8IU81 584 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 HSPA12BQ96MM6 686 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 RNF32Q9H0A6 362 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 DNAJC25Q9H1X3 360 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 SLAMF8Q9P0V8 285 aa5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 GPN3Q9UHW5 284 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-205ENST00000506779 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 EIF1AYO14602 144 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 GPR182O15218 404 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 RTP5Q14D33 572 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 ZNF827Q17R98 1081 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 DTHD1Q6ZMT9 781 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 WDR89Q96FK6 387 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 CITED4Q96RK1 184 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 NIF3L1Q9GZT8 377 aa5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 CCDC86Q9H6F5 360 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 CNOT11Q9UKZ1 510 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-205ENST00000506779 HPXP02790 462 aa5.1□□□□□ -1.59
TOPBP1-205ENST00000506779 PPP2R3AQ06190 1150 aa5.1□□□□□ -1.59
TOPBP1-205ENST00000506779 GRM2Q14416 872 aa5.1□□□□□ -1.59
TOPBP1-205ENST00000506779 VMACQ2NL98 169 aa5.1□□□□□ -1.59
TOPBP1-205ENST00000506779 K7ESM1 405 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 PRICKLE3O43900 615 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 GSTP1P09211 210 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 FCGRTP55899 365 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 FAAP100Q0VG06 881 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 KCNB2Q92953 911 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 DMRTB1Q96MA1 342 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 SSU72Q9NP77 194 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 LUC7LQ9NQ29 371 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 NLRP2Q9NX02 1062 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 PPP4R2Q9NY27 417 aa5.09□□□□□ -1.59
TOPBP1-205ENST00000506779 DNAJC25-GNG10A0A024R161 153 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 ZNF862O60290 1169 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 NEFMP07197 916 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 TRHRP34981 398 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 MAGEA10P43363 369 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 HK2P52789 917 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 KIF4BQ2VIQ3 1234 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 RALGPS1Q5JS13 557 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 EPS8L3Q8TE67 593 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 ISL2Q96A47 359 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 SLC6A17Q9H1V8 727 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 ZNF552Q9H707 407 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 KRT82Q9NSB4 513 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 TMEM39AQ9NV64 488 aa5.08□□□□□ -1.6
TOPBP1-205ENST00000506779 GDF5P43026 501 aa5.07□□□□□ -1.6
TOPBP1-205ENST00000506779 SIGLEC10Q96LC7 697 aa5.07□□□□□ -1.6
TOPBP1-205ENST00000506779 PRDM10Q9NQV6 1147 aa5.07□□□□□ -1.6
TOPBP1-205ENST00000506779 PCDHGC5Q9Y5F6 944 aa5.07□□□□□ -1.6
TOPBP1-205ENST00000506779 IRAK3Q9Y616 596 aa5.07□□□□□ -1.6
TOPBP1-205ENST00000506779 XRCC5P13010 732 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 ADAM17P78536 824 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 HNRNPA0Q13151 305 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 CDKAL1Q5VV42 579 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 SULF2Q8IWU5 870 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 ALKBH8Q96BT7 664 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 ACSBG1Q96GR2 724 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 FOXQ1Q9C009 403 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 PICK1Q9NRD5 415 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 TMEM59LQ9UK28 342 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 AKAP2Q9Y2D5 859 aa5.06□□□□□ -1.6
TOPBP1-205ENST00000506779 H3BS24 57 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 CILPO75339 1184 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 MAP1SQ66K74 1059 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 PI16Q6UXB8 463 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 TXNDC2Q86VQ3 553 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 ZFPM1Q8IX07 1006 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 RETREG2Q8NC44 543 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 EMILIN2Q9BXX0 1053 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 RBCK1Q9BYM8 510 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 BCO2Q9BYV7 579 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 CBX8Q9HC52 389 aa5.05□□□□□ -1.6
TOPBP1-205ENST00000506779 BIN2Q9UBW5 565 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms