RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 CATIPQ7Z7H3 387 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 TTC6Q86TZ1 520 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 FERMT3Q86UX7 667 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 CCDC144CPQ8IYA2 1237 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 FANCBQ8NB91 859 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 CNPY2Q9Y2B0 182 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
SMN2-206ENST00000506734 PTGER2P43116 358 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 CDK8P49336 464 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
SMN2-206ENST00000506734 CSPP1Q1MSJ5 1256 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 DGKHQ86XP1 1220 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
SMN2-206ENST00000506734 PPFIA3O75145 1194 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 FMNL1O95466 1100 aaPredicted RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 TROAPQ12815 778 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 GSE1Q14687 1217 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 RCSD1Q6JBY9 416 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 USP48Q86UV5 1035 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 SLC44A5Q8NCS7 719 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 C8orf76Q96K31 380 aa21.56■■□□□ 1.04
SMN2-206ENST00000506734 OSBPL5Q9H0X9 879 aaPredicted RBP21.56■■□□□ 1.04
SMN2-206ENST00000506734 NMT2O60551 498 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 GABPAQ06546 454 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 PICALMQ13492 652 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 FBXO18Q8NFZ0 1043 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 IL17RBQ9NRM6 502 aa21.55■■□□□ 1.04
SMN2-206ENST00000506734 RBM28Q9NW13 759 aaKnown RBP21.55■■□□□ 1.04
SMN2-206ENST00000506734 GOLGB1Q14789 3259 aaKnown RBP21.55■■□□□ 1.04
SMN2-206ENST00000506734 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 KRT85P78386 507 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 SSRP1Q08945 709 aaKnown RBP21.54■■□□□ 1.04
SMN2-206ENST00000506734 NUP133Q8WUM0 1156 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 PHKBQ93100 1093 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 GMLQ99445 158 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 ZNRF3Q9ULT6 936 aa21.54■■□□□ 1.04
SMN2-206ENST00000506734 MBD3O95983 291 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 NIM1KQ8IY84 436 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 WASF1Q92558 559 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 TAOK3Q9H2K8 898 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 GDPD2Q9HCC8 539 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 PLIN4Q96Q06 1357 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 MYH15Q9Y2K3 1946 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 PSDA5PKW4 1024 aaPredicted RBP21.53■■□□□ 1.04
SMN2-206ENST00000506734 PSMD14O00487 310 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
SMN2-206ENST00000506734 NEDD1Q8NHV4 660 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 GPT2Q8TD30 523 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 MAP3K14Q99558 947 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 ALG1Q9BT22 464 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 SWAP70Q9UH65 585 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
SMN2-206ENST00000506734 NCLP19338 710 aaKnown RBP21.52■■□□□ 1.04
SMN2-206ENST00000506734 RBM5P52756 815 aaKnown RBP eCLIP21.52■■□□□ 1.04
SMN2-206ENST00000506734 FOSBP53539 338 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 NFIAQ12857 509 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 SLC26A6Q9BXS9 759 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 EHD4Q9H223 541 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 PPP1R1BQ9UD71 204 aaPredicted RBP21.52■■□□□ 1.04
SMN2-206ENST00000506734 PCDHAC2Q9Y5I4 1007 aa21.52■■□□□ 1.04
SMN2-206ENST00000506734 ELP1O95163 1332 aa21.52■■□□□ 1.03
SMN2-206ENST00000506734 FIBPO43427 364 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 CFAP100Q494V2 611 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 ATL3Q6DD88 541 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
SMN2-206ENST00000506734 SCAND2PQ9GZW5 306 aaPredicted RBP21.51■■□□□ 1.03
SMN2-206ENST00000506734 DHX36Q9H2U1 1008 aaKnown RBP21.51■■□□□ 1.03
SMN2-206ENST00000506734 KAT14Q9H8E8 782 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 SERPINB13Q9UIV8 391 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
SMN2-206ENST00000506734 NFKBIEO00221 500 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 RAD17O75943 681 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 DEXIO95424 95 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 HLA-DOAP06340 250 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 NOVP48745 357 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 GUCY1B3Q02153 619 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 FUT2Q10981 343 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 FAM173BQ6P4H8 233 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 FAM198AQ9UFP1 575 aa21.5■■□□□ 1.03
SMN2-206ENST00000506734 COL2A1P02458 1487 aaPredicted RBP21.5■■□□□ 1.03
SMN2-206ENST00000506734 UBE2HP62256 183 aa21.49■■□□□ 1.03
SMN2-206ENST00000506734 TMTC3Q6ZXV5 915 aa21.49■■□□□ 1.03
SMN2-206ENST00000506734 AGBL3Q8NEM8 1001 aa21.49■■□□□ 1.03
SMN2-206ENST00000506734 CTCFLQ8NI51 663 aaPredicted RBP21.49■■□□□ 1.03
SMN2-206ENST00000506734 HDAC9Q9UKV0 1011 aa21.49■■□□□ 1.03
SMN2-206ENST00000506734 ARFGEF1Q9Y6D6 1849 aa21.49■■□□□ 1.03
SMN2-206ENST00000506734 OTUD7BQ6GQQ9 843 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 BRAPQ7Z569 592 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 PNMA1Q8ND90 353 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 AIFM3Q96NN9 605 aa21.48■■□□□ 1.03
SMN2-206ENST00000506734 GZF1Q9H116 711 aaPredicted RBP21.48■■□□□ 1.03
SMN2-206ENST00000506734 MYH8P13535 1937 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms