RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 XAGE3Q8WTP9 111 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
TRIO-208ENST00000506611 RHOVQ96L33 236 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 PRDM7Q9NQW5 492 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 CORINQ9Y5Q5 1042 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 SNX11Q9Y5W9 270 aa7.37□□□□□ -1.23
TRIO-208ENST00000506611 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
TRIO-208ENST00000506611 FAM221AA4D161 298 aa7.36□□□□□ -1.23
TRIO-208ENST00000506611 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
TRIO-208ENST00000506611 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
TRIO-208ENST00000506611 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
TRIO-208ENST00000506611 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
TRIO-208ENST00000506611 MFSD2AQ8NA29 543 aa7.36□□□□□ -1.23
TRIO-208ENST00000506611 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
TRIO-208ENST00000506611 TACC3Q9Y6A5 838 aa7.36□□□□□ -1.23
TRIO-208ENST00000506611 CILPO75339 1184 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 F13A1P00488 732 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 PF4P02776 101 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 PGRP06401 933 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 LMNB1P20700 586 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 CAMK2GQ13555 558 aaPredicted RBP7.35□□□□□ -1.23
TRIO-208ENST00000506611 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 LRRN4CLQ8ND94 238 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 SEMA3GQ9NS98 782 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 VTI1BQ9UEU0 232 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 CARMIL2Q6F5E8 1435 aa7.35□□□□□ -1.23
TRIO-208ENST00000506611 RLBP1P12271 317 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 LMNB2Q03252 620 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 RC3H2Q9HBD1 1191 aaKnown RBP7.34□□□□□ -1.23
TRIO-208ENST00000506611 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 TPX2Q9ULW0 747 aaKnown RBP7.34□□□□□ -1.23
TRIO-208ENST00000506611 ST14Q9Y5Y6 855 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 CAPN6Q9Y6Q1 641 aa7.34□□□□□ -1.23
TRIO-208ENST00000506611 GNAT3A8MTJ3 354 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 ERCC3P19447 782 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 GARTP22102 1010 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 CLCN7P51798 805 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 SFRP5Q5T4F7 317 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
TRIO-208ENST00000506611 CDH24Q86UP0 819 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 PI4K2BQ8TCG2 481 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 TMEM74Q96NL1 305 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 ATP13A1Q9HD20 1204 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 COPRSQ9NQ92 184 aa7.33□□□□□ -1.24
TRIO-208ENST00000506611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
TRIO-208ENST00000506611 UPK3BL1B0FP48 263 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 UPK3BL2E5RIL1 263 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 JUNBP17275 347 aaPredicted RBP7.32□□□□□ -1.24
TRIO-208ENST00000506611 IKZF1Q13422 519 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 CCDC84Q86UT8 332 aaPredicted RBP7.32□□□□□ -1.24
TRIO-208ENST00000506611 MCATQ8IVS2 390 aaKnown RBP7.32□□□□□ -1.24
TRIO-208ENST00000506611 MFSD4AQ8N468 514 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 DNAJB8Q8NHS0 232 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 PPP1R13LQ8WUF5 828 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 ASB11Q8WXH4 323 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 GATAD2BQ8WXI9 593 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 RSRP1Q9BUV0 290 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
TRIO-208ENST00000506611 POLR3KQ9Y2Y1 108 aaPredicted RBP7.32□□□□□ -1.24
TRIO-208ENST00000506611 FAM160A1Q05DH4 1040 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 MRPL58Q14197 206 aaKnown RBP7.31□□□□□ -1.24
TRIO-208ENST00000506611 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 SLC6A19Q695T7 634 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 OGFOD2Q6N063 350 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 SLC23A3Q6PIS1 610 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 ERMP1Q7Z2K6 904 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 FBXO27Q8NI29 283 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 ADAM30Q9UKF2 790 aa7.31□□□□□ -1.24
TRIO-208ENST00000506611 BICRAQ9NZM4 1560 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 H3BS24 57 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 DNAJA2O60884 412 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 CBX7O95931 251 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 GBP2P32456 591 aaPredicted RBP7.3□□□□□ -1.24
TRIO-208ENST00000506611 ZP2Q05996 745 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 TNK2Q07912 1038 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 LDLRAD1Q5T700 205 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 Q96M66 194 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 BCL2L13Q9BXK5 485 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 KBTBD4Q9NVX7 518 aa7.3□□□□□ -1.24
TRIO-208ENST00000506611 PRR36Q9H6K5 1346 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 WASH4PA8MWX3 477 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 MINDY4BA8MYZ0 360 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 TXKP42681 527 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 PDE4BQ07343 736 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 TMEM201Q5SNT2 666 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 ATG4DQ86TL0 474 aaPredicted RBP7.29□□□□□ -1.24
TRIO-208ENST00000506611 ASIC4Q96FT7 647 aa7.29□□□□□ -1.24
TRIO-208ENST00000506611 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
TRIO-208ENST00000506611 GRIN3BO60391 1043 aa7.28□□□□□ -1.24
TRIO-208ENST00000506611 PLCG1P19174 1290 aa7.28□□□□□ -1.24
TRIO-208ENST00000506611 GOLM1Q8NBJ4 401 aa7.28□□□□□ -1.24
TRIO-208ENST00000506611 CARS2Q9HA77 564 aaKnown RBP7.28□□□□□ -1.24
TRIO-208ENST00000506611 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
TRIO-208ENST00000506611 ZNF746Q6NUN9 644 aaPredicted RBP7.27□□□□□ -1.25
TRIO-208ENST00000506611 FBXL19Q6PCT2 694 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms