RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IGBP1P78318 339 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 NCAPHQ15003 741 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 SETDB1Q15047 1291 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 RSPO4Q2I0M5 234 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZC3H12AQ5D1E8 599 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 ARSHQ5FYA8 562 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 CDCP2Q5VXM1 449 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 OVOS1Q6IE37 1185 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 UNC5AQ6ZN44 842 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 EEPD1Q7L9B9 569 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 C12orf40Q86WS4 652 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 DMRTC2Q8IXT2 367 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 ST13P5Q8NFI4 369 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 THAP3Q8WTV1 239 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZNF669Q96BR6 464 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 BRINP2Q9C0B6 783 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 WNT10AQ9GZT5 417 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 PHAXQ9H814 394 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 CNNM2Q9H8M5 875 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 KANSL2Q9H9L4 492 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 PICK1Q9NRD5 415 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 CSADQ9Y600 493 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 KDM2BQ8NHM5 1336 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 SYNGAP1Q96PV0 1343 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 LOC100289279A0A1B0GTE1 492 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 B2RBV5 119 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 TNFRSF10CO14798 259 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 CD68P34810 354 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 GATA4P43694 442 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 ETF1P62495 437 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 ERVK-24P63145 666 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 C2orf27AQ580R0 203 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 EXOSC6Q5RKV6 272 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 VHLLQ6RSH7 139 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 C16orf86Q6ZW13 317 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 FILIP1Q7Z7B0 1213 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 DTWD1Q8N5C7 304 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 GALNT11Q8NCW6 608 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 WDR18Q9BV38 432 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 PLVAPQ9BX97 442 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 SPC25Q9HBM1 224 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 TMEM260Q9NX78 707 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 KLHL3Q9UH77 587 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 PFDN2Q9UHV9 154 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 UNC13AQ9UPW8 1703 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 HIF3AQ9Y2N7 669 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 PRKAB1Q9Y478 270 aa4.59□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZCCHC6Q5VYS8 1495 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 LTBP3Q9NS15 1303 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 CHURC1-FNTBB4DL54 471 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 FAM229AH3BQW9 127 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 TM4SF5O14894 197 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 FANCGO15287 622 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 DDX3YO15523 660 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 DNAJC6O75061 913 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ACRP10323 421 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 RAG1P15918 1043 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 YARSP54577 528 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ANAPC15P60006 121 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ID3Q02535 119 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 RING1Q06587 406 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 SSRP1Q08945 709 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZYXQ15942 572 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 NKAPLQ5M9Q1 402 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ILDR2Q71H61 639 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 SPATC1Q76KD6 591 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 JMYQ8N9B5 988 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZNF507Q8TCN5 953 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 GPATCH3Q96I76 525 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC9A7Q96T83 725 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 EPN3Q9H201 632 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 CWC22Q9HCG8 908 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 TPSG1Q9NRR2 321 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 IFT57Q9NWB7 429 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZMYM5Q9UJ78 669 aa4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 NOP58Q9Y2X3 529 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-205ENST00000506426 SCRIBQ14160 1630 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 IQCA1LA6NCM1 817 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 UPK3BL1B0FP48 263 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 UPK3BL2E5RIL1 263 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 DIAPH1O60610 1272 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 DNAJA2O60884 412 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 ADAM11O75078 769 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 DLGAP3O95886 979 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 NID1P14543 1247 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 CCNFP41002 786 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 GYS2P54840 703 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC7A5Q01650 507 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 SQSTM1Q13501 440 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 TCEA2Q15560 299 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 DUOXA2Q1HG44 320 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 GNPTABQ3T906 1256 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 PPM1JQ5JR12 505 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 TRAPPC3LQ5T215 181 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZBTB37Q5TC79 503 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC6A19Q695T7 634 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 MRM1Q6IN84 353 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms