RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FBXO46Q6PJ61 603 aaPredicted RBP18.71■□□□□ 0.59
MED28-204ENST00000506409 OTOP1Q7RTM1 612 aa18.71■□□□□ 0.59
MED28-204ENST00000506409 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
MED28-204ENST00000506409 ATP8A2Q9NTI2 1148 aa18.71■□□□□ 0.59
MED28-204ENST00000506409 SLC45A1Q9Y2W3 748 aa18.71■□□□□ 0.59
MED28-204ENST00000506409 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
MED28-204ENST00000506409 GH2P01242 217 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
MED28-204ENST00000506409 CYP2C8P10632 490 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 HMGCS2P54868 508 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
MED28-204ENST00000506409 C17orf99Q6UX52 265 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
MED28-204ENST00000506409 APPBP2Q92624 585 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 WDR18Q9BV38 432 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 EFCC1Q9HA90 598 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 CPA4Q9UI42 421 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 AGTPBP1Q9UPW5 1226 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
MED28-204ENST00000506409 IGHDP01880 384 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 SHMT1P34896 483 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 GABPAQ06546 454 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 MTMR2Q13614 643 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 ARHGEF6Q15052 776 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 AMOTL1Q8IY63 956 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 LNPKQ9C0E8 428 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
MED28-204ENST00000506409 CYP2D6P10635 497 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 PDE1AP54750 535 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 BACE1P56817 501 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 LACTBP83111 547 aaPredicted RBP18.68■□□□□ 0.58
MED28-204ENST00000506409 CAP1Q01518 475 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 EVX2Q03828 476 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 KIF22Q14807 665 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 ABCB5Q2M3G0 1257 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 SH3D19Q5HYK7 790 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 TREML2Q5T2D2 321 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 STRBPQ96SI9 672 aaKnown RBP18.68■□□□□ 0.58
MED28-204ENST00000506409 STAP2Q9UGK3 403 aa18.68■□□□□ 0.58
MED28-204ENST00000506409 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
MED28-204ENST00000506409 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
MED28-204ENST00000506409 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
MED28-204ENST00000506409 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
MED28-204ENST00000506409 LOC285556D6RIA3 1793 aa18.67■□□□□ 0.58
MED28-204ENST00000506409 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
MED28-204ENST00000506409 C19orf81C9J6K1 198 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 USP17L12C9JPN9 530 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 USP17L21D6R901 530 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
MED28-204ENST00000506409 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 C12orf60Q5U649 245 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 TMOD4Q9NZQ9 345 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 SWAP70Q9UH65 585 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
MED28-204ENST00000506409 GPAA1O43292 621 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 SLC44A5Q8NCS7 719 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 DYNLL2Q96FJ2 89 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 ARHGAP39Q9C0H5 1083 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
MED28-204ENST00000506409 CYP2D7A0A087X1C5 515 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 M0R2C6 588 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 MPHOSPH10O00566 681 aaKnown RBP18.64■□□□□ 0.57
MED28-204ENST00000506409 ECM2O94769 699 aaPredicted RBP18.64■□□□□ 0.57
MED28-204ENST00000506409 BCRP11274 1271 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 GNAT2P19087 354 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 NUCB1Q02818 461 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 CTR9Q6PD62 1173 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 EVI5LQ96CN4 794 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 FEZ1Q99689 392 aa18.64■□□□□ 0.57
MED28-204ENST00000506409 ARPP21Q9UBL0 812 aaPredicted RBP18.64■□□□□ 0.57
MED28-204ENST00000506409 GSG1L2A8MUP6 293 aa18.63■□□□□ 0.57
MED28-204ENST00000506409 GNRH1P01148 92 aa18.63■□□□□ 0.57
MED28-204ENST00000506409 OSBPP22059 807 aa18.63■□□□□ 0.57
MED28-204ENST00000506409 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
MED28-204ENST00000506409 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 APPP05067 770 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 GUCY1A2P33402 732 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 PSMC4P43686 418 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 SEPT2Q15019 361 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 ZMYM1Q5SVZ6 1142 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 USP17L2Q6R6M4 530 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
MED28-204ENST00000506409 ASCC2Q9H1I8 757 aaPredicted RBP18.62■□□□□ 0.57
MED28-204ENST00000506409 ZSWIM8A7E2V4 1837 aa18.62■□□□□ 0.57
MED28-204ENST00000506409 HTTP42858 3142 aa18.61■□□□□ 0.57
MED28-204ENST00000506409 FMNL1O95466 1100 aaPredicted RBP18.61■□□□□ 0.57
MED28-204ENST00000506409 CTGFP29279 349 aa18.61■□□□□ 0.57
MED28-204ENST00000506409 HOXA7P31268 230 aaPredicted RBP18.61■□□□□ 0.57
MED28-204ENST00000506409 CDK8P49336 464 aa18.61■□□□□ 0.57
MED28-204ENST00000506409 USP14P54578 494 aa18.61■□□□□ 0.57
MED28-204ENST00000506409 IRX3P78415 501 aaPredicted RBP18.61■□□□□ 0.57
MED28-204ENST00000506409 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms