RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ADD2P35612 726 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 PSMC4P43686 418 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 USP5P45974 858 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 FASTKD5Q7L8L6 764 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 SH3TC2Q8TF17 1288 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 PARK7Q99497 189 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 ZBTB21Q9ULJ3 1066 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 AGTPBP1Q9UPW5 1226 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 MAGEB6P1A0A0J9YX57 407 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 OSBPP22059 807 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 TTF1Q15361 905 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 SH3D19Q5HYK7 790 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 ZNF333Q96JL9 665 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 GABRQQ9UN88 632 aa20.31■□□□□ 0.84
PDLIM7-215ENST00000506161 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-215ENST00000506161 MTMR2Q13614 643 aa20.3■□□□□ 0.84
PDLIM7-215ENST00000506161 TATDN1Q6P1N9 297 aa20.3■□□□□ 0.84
PDLIM7-215ENST00000506161 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-215ENST00000506161 SLC45A1Q9Y2W3 748 aa20.3■□□□□ 0.84
PDLIM7-215ENST00000506161 SHMT1P34896 483 aa20.29■□□□□ 0.84
PDLIM7-215ENST00000506161 GABPAQ06546 454 aa20.29■□□□□ 0.84
PDLIM7-215ENST00000506161 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
PDLIM7-215ENST00000506161 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
PDLIM7-215ENST00000506161 RLFQ13129 1914 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 GH2P01242 217 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 HLA-DOAP06340 250 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 PROCA1Q8NCQ7 364 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 SLC44A5Q8NCS7 719 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 DCP1AQ9NPI6 582 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 SRRDQ9UH36 339 aa20.28■□□□□ 0.84
PDLIM7-215ENST00000506161 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 CYP2D7A0A087X1C5 515 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 H0YGN5 161 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 MBD4O95243 580 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 ASNSP08243 561 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 PRKCZQ05513 592 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 NBPF11Q86T75 865 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 ANKRD13CQ8N6S4 541 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 EHD4Q9H223 541 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 SERPINB13Q9UIV8 391 aa20.27■□□□□ 0.84
PDLIM7-215ENST00000506161 FMNL1O95466 1100 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 BACE1P56817 501 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 KIF22Q14807 665 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 MTFR1Q15390 333 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 SLC9C1Q4G0N8 1177 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 MYPNQ86TC9 1320 aa20.26■□□□□ 0.83
PDLIM7-215ENST00000506161 DLL1O00548 723 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 ARHGEF6Q15052 776 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 ACER1Q8TDN7 264 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 TRIM34Q9BYJ4 488 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-215ENST00000506161 ZYXQ15942 572 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 TMED8Q6PL24 325 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 CHRDL2Q6WN34 429 aa20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 CERS3Q8IU89 383 aa20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 SMCR8Q8TEV9 937 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
PDLIM7-215ENST00000506161 POLR3DP05423 398 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-215ENST00000506161 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
PDLIM7-215ENST00000506161 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-215ENST00000506161 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
PDLIM7-215ENST00000506161 USP17L10C9JJH3 530 aa20.22■□□□□ 0.83
PDLIM7-215ENST00000506161 SEPT2Q15019 361 aa20.22■□□□□ 0.83
PDLIM7-215ENST00000506161 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
PDLIM7-215ENST00000506161 CERKLQ49MI3 558 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-215ENST00000506161 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
PDLIM7-215ENST00000506161 GNRH1P01148 92 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 HOXA7P31268 230 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 FLT3LGP49771 235 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 FCGRTP55899 365 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 RAB3GAP1Q15042 981 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 FAM110CQ1W6H9 321 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 ABCB5Q2M3G0 1257 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 SLC17A8Q8NDX2 589 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 OSBP2Q969R2 916 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 TRIOBPQ9H2D6 2365 aa20.21■□□□□ 0.83
PDLIM7-215ENST00000506161 A0A0G2JMZ2 1700 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 ELNP15502 786 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 PRMT2P55345 433 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 KIAA1755Q5JYT7 1200 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
PDLIM7-215ENST00000506161 GINM1Q9NU53 330 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms