RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 SFRP5Q5T4F7 317 aa9.63□□□□□ -0.87
LIN54-205ENST00000505905 C1QL4Q86Z23 238 aa9.63□□□□□ -0.87
LIN54-205ENST00000505905 FAM8A1Q9UBU6 413 aa9.63□□□□□ -0.87
LIN54-205ENST00000505905 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 FAM155AB1AL88 458 aaPredicted RBP9.62□□□□□ -0.87
LIN54-205ENST00000505905 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
LIN54-205ENST00000505905 TSPAN15O95858 294 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 WIPI1Q5MNZ9 446 aaPredicted RBP9.62□□□□□ -0.87
LIN54-205ENST00000505905 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 PRR23BQ6ZRT6 265 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 SV2BQ7L1I2 683 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
LIN54-205ENST00000505905 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
LIN54-205ENST00000505905 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
LIN54-205ENST00000505905 H3BS24 57 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 KRT1P04264 644 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 GDNFP39905 211 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 KRTAP19-4Q3LI73 84 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 LETMD1Q6P1Q0 360 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 NPAS4Q8IUM7 802 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 MFSD2AQ8NA29 543 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 SNCAIPQ9Y6H5 919 aa9.61□□□□□ -0.87
LIN54-205ENST00000505905 CST3P01034 146 aaPredicted RBP9.6□□□□□ -0.87
LIN54-205ENST00000505905 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
LIN54-205ENST00000505905 HID1Q8IV36 788 aa9.6□□□□□ -0.87
LIN54-205ENST00000505905 GFRA2O00451 464 aa9.59□□□□□ -0.87
LIN54-205ENST00000505905 CFPP27918 469 aa9.59□□□□□ -0.87
LIN54-205ENST00000505905 PRAMEF13Q5VWM6 474 aa9.59□□□□□ -0.87
LIN54-205ENST00000505905 TTBK2Q6IQ55 1244 aa9.59□□□□□ -0.87
LIN54-205ENST00000505905 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
LIN54-205ENST00000505905 RAP1GAPP47736 663 aa9.58□□□□□ -0.88
LIN54-205ENST00000505905 ETF1P62495 437 aaKnown RBP9.58□□□□□ -0.88
LIN54-205ENST00000505905 GRK4P32298 578 aa9.57□□□□□ -0.88
LIN54-205ENST00000505905 ATP2B2Q01814 1243 aa9.57□□□□□ -0.88
LIN54-205ENST00000505905 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
LIN54-205ENST00000505905 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
LIN54-205ENST00000505905 TNK2Q07912 1038 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 SYDE1Q6ZW31 735 aaPredicted RBP9.56□□□□□ -0.88
LIN54-205ENST00000505905 ALPK1Q96QP1 1244 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 KRTAP4-2Q9BYR5 136 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 TTF2Q9UNY4 1162 aaKnown RBP9.56□□□□□ -0.88
LIN54-205ENST00000505905 PCDHB5Q9Y5E4 795 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 IVNS1ABPQ9Y6Y0 642 aa9.56□□□□□ -0.88
LIN54-205ENST00000505905 CBX7O95931 251 aa9.55□□□□□ -0.88
LIN54-205ENST00000505905 RPS26P62854 115 aaKnown RBP9.55□□□□□ -0.88
LIN54-205ENST00000505905 UBE2FQ969M7 185 aa9.55□□□□□ -0.88
LIN54-205ENST00000505905 ESR1P03372 595 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
LIN54-205ENST00000505905 SEPT6Q14141 434 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 ZNF746Q6NUN9 644 aaPredicted RBP9.54□□□□□ -0.88
LIN54-205ENST00000505905 MPZL3Q6UWV2 235 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 XAGE3Q8WTP9 111 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 FRMD6Q96NE9 622 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 TOX2Q96NM4 488 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 TACC3Q9Y6A5 838 aa9.54□□□□□ -0.88
LIN54-205ENST00000505905 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
LIN54-205ENST00000505905 KIR3DL1P43629 444 aa9.53□□□□□ -0.88
LIN54-205ENST00000505905 MRPL41Q8IXM3 137 aaKnown RBP9.53□□□□□ -0.88
LIN54-205ENST00000505905 LRRC56Q8IYG6 542 aaPredicted RBP9.53□□□□□ -0.88
LIN54-205ENST00000505905 COX4I2Q96KJ9 171 aa9.53□□□□□ -0.88
LIN54-205ENST00000505905 TJP2Q9UDY2 1190 aa9.53□□□□□ -0.88
LIN54-205ENST00000505905 DNAJC25-GNG10A0A024R161 153 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 GNA15P30679 374 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 CDH24Q86UP0 819 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 KCNK12Q9HB15 430 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 SLAMF8Q9P0V8 285 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
LIN54-205ENST00000505905 RALGPS1Q5JS13 557 aa9.51□□□□□ -0.89
LIN54-205ENST00000505905 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
LIN54-205ENST00000505905 DNAJB8Q8NHS0 232 aa9.51□□□□□ -0.89
LIN54-205ENST00000505905 Q96M66 194 aa9.51□□□□□ -0.89
LIN54-205ENST00000505905 DPH2Q9BQC3 489 aaPredicted RBP9.51□□□□□ -0.89
LIN54-205ENST00000505905 NSUN3Q9H649 340 aaKnown RBP9.51□□□□□ -0.89
LIN54-205ENST00000505905 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
LIN54-205ENST00000505905 WASH4PA8MWX3 477 aa9.5□□□□□ -0.89
LIN54-205ENST00000505905 EIF4BP23588 611 aaKnown RBP9.5□□□□□ -0.89
LIN54-205ENST00000505905 CCDC85BQ15834 202 aaPredicted RBP9.5□□□□□ -0.89
LIN54-205ENST00000505905 FBXO15Q8NCQ5 510 aaPredicted RBP9.5□□□□□ -0.89
LIN54-205ENST00000505905 PIWIL2Q8TC59 973 aaKnown RBP9.5□□□□□ -0.89
LIN54-205ENST00000505905 CCDC120Q96HB5 630 aa9.5□□□□□ -0.89
LIN54-205ENST00000505905 DIRC2Q96SL1 478 aa9.5□□□□□ -0.89
LIN54-205ENST00000505905 CYP7A1P22680 504 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 ERVFC1P60507 584 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 GAB4Q2WGN9 574 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 TMPRSS7Q7RTY8 843 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 ANKLE2Q86XL3 938 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
LIN54-205ENST00000505905 DUSP15Q9H1R2 295 aaPredicted RBP9.49□□□□□ -0.89
LIN54-205ENST00000505905 LIG3P49916 1009 aa9.48□□□□□ -0.89
LIN54-205ENST00000505905 SIAH1Q8IUQ4 282 aa9.48□□□□□ -0.89
LIN54-205ENST00000505905 SP110Q9HB58 689 aa9.48□□□□□ -0.89
LIN54-205ENST00000505905 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
LIN54-205ENST00000505905 TFE3P19532 575 aaPredicted RBP9.47□□□□□ -0.89
LIN54-205ENST00000505905 KCNA1Q09470 495 aa9.47□□□□□ -0.89
LIN54-205ENST00000505905 SLC6A19Q695T7 634 aa9.47□□□□□ -0.89
LIN54-205ENST00000505905 ABHD4Q8TB40 342 aa9.47□□□□□ -0.89
LIN54-205ENST00000505905 PPP1R13LQ8WUF5 828 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms