RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 GDF11O95390 407 aa27.3■■□□□ 1.96
SPOCK1-204ENST00000505690 PTPRAP18433 802 aa27.3■■□□□ 1.96
SPOCK1-204ENST00000505690 GJA5P36382 358 aa27.3■■□□□ 1.96
SPOCK1-204ENST00000505690 MAP2K2P36507 400 aa27.29■■□□□ 1.96
SPOCK1-204ENST00000505690 PPATQ06203 517 aa27.29■■□□□ 1.96
SPOCK1-204ENST00000505690 STK11IPQ8N1F8 1099 aa27.29■■□□□ 1.96
SPOCK1-204ENST00000505690 GINM1Q9NU53 330 aa27.29■■□□□ 1.96
SPOCK1-204ENST00000505690 SLC3A2P08195 630 aaKnown RBP27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 ASNSP08243 561 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 JAG1P78504 1218 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 PPIL2Q13356 520 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 ZIC5Q96T25 663 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 ANAPC4Q9UJX5 808 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 ZBTB21Q9ULJ3 1066 aa27.28■■□□□ 1.96
SPOCK1-204ENST00000505690 KIF23Q02241 960 aaPredicted RBP27.27■■□□□ 1.96
SPOCK1-204ENST00000505690 ABCB5Q2M3G0 1257 aa27.27■■□□□ 1.96
SPOCK1-204ENST00000505690 SHROOM1Q2M3G4 852 aaPredicted RBP27.27■■□□□ 1.96
SPOCK1-204ENST00000505690 MYH8P13535 1937 aa27.27■■□□□ 1.96
SPOCK1-204ENST00000505690 GH2P01242 217 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 CTDSPL2Q05D32 466 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 CCDC84Q86UT8 332 aaPredicted RBP27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 MKNK2Q9HBH9 465 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 ZNF287Q9HBT7 754 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 CABP5Q9NP86 173 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 CTNNA3Q9UI47 895 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 ZHX2Q9Y6X8 837 aa27.26■■□□□ 1.95
SPOCK1-204ENST00000505690 USP17L5A8MUK1 530 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 IRF6O14896 467 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 PTH1RQ03431 593 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 PDE4BQ07343 736 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 KIAA1211Q6ZU35 1233 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 CCDC17Q96LX7 622 aa27.25■■□□□ 1.95
SPOCK1-204ENST00000505690 MPHOSPH10O00566 681 aaKnown RBP27.24■■□□□ 1.95
SPOCK1-204ENST00000505690 HAND2P61296 217 aa27.24■■□□□ 1.95
SPOCK1-204ENST00000505690 TBC1D2Q9BYX2 928 aa27.24■■□□□ 1.95
SPOCK1-204ENST00000505690 PHIPQ8WWQ0 1821 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 MANSC4A6NHS7 340 aaPredicted RBP27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 AKR1B1P15121 316 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 RASA1P20936 1047 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 JMYQ8N9B5 988 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 AS3MTQ9HBK9 375 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 KCNH4Q9UQ05 1017 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 AFG3L2Q9Y4W6 797 aa27.23■■□□□ 1.95
SPOCK1-204ENST00000505690 ZNF213O14771 459 aa27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 PRDM1O75626 825 aa27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 GTF2A2P52657 109 aa27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 RAB3GAP1Q15042 981 aa27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 REM2Q8IYK8 340 aaPredicted RBP27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 LSG1Q9H089 658 aaKnown RBP27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 U3KPZ7 1027 aaPredicted RBP27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 LAMA4Q16363 1823 aa27.22■■□□□ 1.95
SPOCK1-204ENST00000505690 GUCY1A2P33402 732 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 SREBF2Q12772 1141 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 SNAPC2Q13487 334 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 IMMTQ16891 758 aaKnown RBP27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 TMEM179Q6ZVK1 233 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 ZNF444Q8N0Y2 327 aaPredicted RBP27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 MAP4K1Q92918 833 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 MS4A4AQ96JQ5 239 aa27.21■■□□□ 1.95
SPOCK1-204ENST00000505690 CXCL11O14625 94 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 SEPT2Q15019 361 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 ZNF280CQ8ND82 737 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 WDR18Q9BV38 432 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 NBPF3Q9H094 633 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 ANO2Q9NQ90 1003 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 INCENPQ9NQS7 918 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 TACC3Q9Y6A5 838 aa27.2■■□□□ 1.94
SPOCK1-204ENST00000505690 TRIM75PA6NK02 468 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 FGRP09769 529 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 TM4SF4P48230 202 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 INHBEP58166 350 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 SPP2Q13103 211 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 TBC1D10CQ8IV04 446 aa27.19■■□□□ 1.94
SPOCK1-204ENST00000505690 CCL15-CCL14A0A0B4J2E2 113 aa27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 TESPA1A2RU30 521 aaPredicted RBP27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 CETPP11597 493 aa27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 MAP2K1Q02750 393 aaPredicted RBP27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 CCL15Q16663 113 aa27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 AKNAD1Q5T1N1 836 aa27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 STAG1Q8WVM7 1258 aa27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 RBM8AQ9Y5S9 174 aaKnown RBP27.18■■□□□ 1.94
SPOCK1-204ENST00000505690 ORC4O43929 436 aa27.17■■□□□ 1.94
SPOCK1-204ENST00000505690 PCP11498 1178 aaKnown RBP27.17■■□□□ 1.94
SPOCK1-204ENST00000505690 MFSD6Q6ZSS7 791 aa27.17■■□□□ 1.94
SPOCK1-204ENST00000505690 BRI3BPQ8WY22 251 aa27.17■■□□□ 1.94
SPOCK1-204ENST00000505690 RNF41Q9H4P4 317 aaPredicted RBP27.17■■□□□ 1.94
SPOCK1-204ENST00000505690 A0A0G2JLL6 359 aaPredicted RBP27.16■■□□□ 1.94
SPOCK1-204ENST00000505690 PRRT2Q7Z6L0 340 aaPredicted RBP27.16■■□□□ 1.94
SPOCK1-204ENST00000505690 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.16■■□□□ 1.94
SPOCK1-204ENST00000505690 TOMM22Q9NS69 142 aa27.16■■□□□ 1.94
SPOCK1-204ENST00000505690 GREB1LQ9C091 1923 aaPredicted RBP27.16■■□□□ 1.94
SPOCK1-204ENST00000505690 TSPY3P0CV98 308 aa27.15■■□□□ 1.94
SPOCK1-204ENST00000505690 TSPY8P0CW00 308 aa27.15■■□□□ 1.94
SPOCK1-204ENST00000505690 TFAP4Q01664 338 aa27.15■■□□□ 1.94
SPOCK1-204ENST00000505690 FAM47AQ5JRC9 791 aa27.15■■□□□ 1.94
SPOCK1-204ENST00000505690 PLIN4Q96Q06 1357 aa27.14■■□□□ 1.94
SPOCK1-204ENST00000505690 USP17L10C9JJH3 530 aa27.14■■□□□ 1.94
SPOCK1-204ENST00000505690 RANBP6O60518 1105 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms