RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 FAM237AA0A1B0GTK4 181 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 RFC4P35249 363 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 CATIPQ7Z7H3 387 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 IQCA1Q86XH1 822 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 BPIFA3Q9BQP9 254 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 CABP5Q9NP86 173 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 V9GY48 417 aaPredicted RBP22.46■■□□□ 1.19
SDHA-206ENST00000505555 MYH2Q9UKX2 1941 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 FGRP09769 529 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 AKAP17AQ02040 695 aaKnown RBP22.46■■□□□ 1.19
SDHA-206ENST00000505555 PKN1Q16512 942 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 LRRC8AQ8IWT6 810 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
SDHA-206ENST00000505555 FAM205CA6NFA0 338 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 FOXN1O15353 648 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 FUT2Q10981 343 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 METTL16Q86W50 562 aaKnown RBP22.45■■□□□ 1.18
SDHA-206ENST00000505555 RNF26Q9BY78 433 aaPredicted RBP22.45■■□□□ 1.18
SDHA-206ENST00000505555 CRNKL1Q9BZJ0 848 aaKnown RBP22.45■■□□□ 1.18
SDHA-206ENST00000505555 ANKIB1Q9P2G1 1089 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 TUBE1Q9UJT0 475 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 TROAPQ12815 778 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 NCAPHQ15003 741 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 RILPL1Q5EBL4 403 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 FOXP4Q8IVH2 680 aaPredicted RBP22.45■■□□□ 1.18
SDHA-206ENST00000505555 MYRIPQ8NFW9 859 aa22.45■■□□□ 1.18
SDHA-206ENST00000505555 FBXO2Q9UK22 296 aaPredicted RBP22.45■■□□□ 1.18
SDHA-206ENST00000505555 KRBA2Q6ZNG9 492 aa22.44■■□□□ 1.18
SDHA-206ENST00000505555 CNNM3Q8NE01 707 aa22.44■■□□□ 1.18
SDHA-206ENST00000505555 FAM13BQ9NYF5 915 aa22.44■■□□□ 1.18
SDHA-206ENST00000505555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.44■■□□□ 1.18
SDHA-206ENST00000505555 TRAPPC3LQ5T215 181 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 FAM196AQ6ZSG2 479 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 TSC1Q92574 1164 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 PRIMPOLQ96LW4 560 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 NFIXQ14938 502 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 EARS2Q5JPH6 523 aaKnown RBP22.43■■□□□ 1.18
SDHA-206ENST00000505555 GPR101Q96P66 508 aaPredicted RBP22.43■■□□□ 1.18
SDHA-206ENST00000505555 IFNKQ9P0W0 207 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 PDS5AQ29RF7 1337 aaKnown RBP22.43■■□□□ 1.18
SDHA-206ENST00000505555 IRS2Q9Y4H2 1338 aa22.43■■□□□ 1.18
SDHA-206ENST00000505555 SMC2O95347 1197 aa22.42■■□□□ 1.18
SDHA-206ENST00000505555 PTPREP23469 700 aa22.42■■□□□ 1.18
SDHA-206ENST00000505555 PPP2R5BQ15173 497 aa22.42■■□□□ 1.18
SDHA-206ENST00000505555 DZIP1Q86YF9 867 aaKnown RBP22.42■■□□□ 1.18
SDHA-206ENST00000505555 XPO4Q9C0E2 1151 aaKnown RBP22.42■■□□□ 1.18
SDHA-206ENST00000505555 COL24A1Q17RW2 1714 aa22.42■■□□□ 1.18
SDHA-206ENST00000505555 LMOD1P29536 600 aaPredicted RBP22.42■■□□□ 1.18
SDHA-206ENST00000505555 ATP8A2Q9NTI2 1148 aa22.42■■□□□ 1.18
SDHA-206ENST00000505555 MYH13Q9UKX3 1938 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 PRPF3O43395 683 aaKnown RBP22.41■■□□□ 1.18
SDHA-206ENST00000505555 USP17L8P0C7I0 530 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 PCDHA5Q9Y5H7 936 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 PCP11498 1178 aaKnown RBP22.41■■□□□ 1.18
SDHA-206ENST00000505555 USP49Q70CQ1 688 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 C16orf45Q96MC5 204 aaPredicted RBP22.41■■□□□ 1.18
SDHA-206ENST00000505555 PHF20Q9BVI0 1012 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 MCM9Q9NXL9 1143 aa22.41■■□□□ 1.18
SDHA-206ENST00000505555 SMTNL1A8MU46 457 aa22.4■■□□□ 1.18
SDHA-206ENST00000505555 POLR2DO15514 142 aaKnown RBP22.4■■□□□ 1.18
SDHA-206ENST00000505555 ORC4O43929 436 aa22.4■■□□□ 1.18
SDHA-206ENST00000505555 GRIK5Q16478 980 aa22.4■■□□□ 1.18
SDHA-206ENST00000505555 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
SDHA-206ENST00000505555 HSD3B7Q9H2F3 369 aa22.4■■□□□ 1.18
SDHA-206ENST00000505555 SKILP12757 684 aa22.39■■□□□ 1.18
SDHA-206ENST00000505555 ATP1A3P13637 1013 aa22.39■■□□□ 1.18
SDHA-206ENST00000505555 XBP1P17861 261 aa22.39■■□□□ 1.18
SDHA-206ENST00000505555 MDM2Q00987 491 aaPredicted RBP22.39■■□□□ 1.18
SDHA-206ENST00000505555 SRBD1Q8N5C6 995 aaKnown RBP22.39■■□□□ 1.18
SDHA-206ENST00000505555 PDILTQ8N807 584 aa22.39■■□□□ 1.18
SDHA-206ENST00000505555 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.18
SDHA-206ENST00000505555 RBM28Q9NW13 759 aaKnown RBP22.39■■□□□ 1.18
SDHA-206ENST00000505555 TNRC6CQ9HCJ0 1690 aaKnown RBP22.39■■□□□ 1.18
SDHA-206ENST00000505555 EP400Q96L91 3159 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 KRT2P35908 639 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 GRAPQ13588 217 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 TMTC3Q6ZXV5 915 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 CNBD1Q8NA66 436 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
SDHA-206ENST00000505555 MAP7D2Q96T17 732 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 SERTAD1Q9UHV2 236 aa22.39■■□□□ 1.17
SDHA-206ENST00000505555 WNT7AO00755 349 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 CALM1P0DP23 149 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 CALM2P0DP24 149 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 CALM3P0DP25 149 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 BMP6P22004 513 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 GRAMD1CQ8IYS0 662 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 CSRNP2Q9H175 543 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 ARPP21Q9UBL0 812 aaPredicted RBP22.38■■□□□ 1.17
SDHA-206ENST00000505555 SRPRBQ9Y5M8 271 aaKnown RBP22.38■■□□□ 1.17
SDHA-206ENST00000505555 TSPY2A6NKD2 308 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 DDAH1O94760 285 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 TPM4P67936 248 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 DIXDC1Q155Q3 683 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 NHSQ6T4R5 1651 aa22.38■■□□□ 1.17
SDHA-206ENST00000505555 IKBKBO14920 756 aa22.37■■□□□ 1.17
SDHA-206ENST00000505555 LDHBP07195 334 aaKnown RBP22.37■■□□□ 1.17
SDHA-206ENST00000505555 PRR29P0C7W0 189 aa22.37■■□□□ 1.17
SDHA-206ENST00000505555 VEGFAP15692 232 aaPredicted RBP22.37■■□□□ 1.17
SDHA-206ENST00000505555 CCZ1BP86790 482 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 248.6 ms