RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 GINM1Q9NU53 330 aa20.77■□□□□ 0.92
DDR1-257ENST00000505534 BAG3O95817 575 aa20.76■□□□□ 0.91
DDR1-257ENST00000505534 PRKAR2AP13861 404 aaKnown RBP20.76■□□□□ 0.91
DDR1-257ENST00000505534 SYN1P17600 705 aa20.76■□□□□ 0.91
DDR1-257ENST00000505534 HERVK_113P62684 666 aa20.76■□□□□ 0.91
DDR1-257ENST00000505534 FOXP4Q8IVH2 680 aaPredicted RBP20.76■□□□□ 0.91
DDR1-257ENST00000505534 TDHQ8IZJ6 230 aa20.76■□□□□ 0.91
DDR1-257ENST00000505534 DEFB123Q8N688 67 aa20.76■□□□□ 0.91
DDR1-257ENST00000505534 USP17L10C9JJH3 530 aa20.75■□□□□ 0.91
DDR1-257ENST00000505534 MAPK4P31152 587 aa20.75■□□□□ 0.91
DDR1-257ENST00000505534 PPP4CP60510 307 aa20.75■□□□□ 0.91
DDR1-257ENST00000505534 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDR1-257ENST00000505534 METTL16Q86W50 562 aaKnown RBP20.75■□□□□ 0.91
DDR1-257ENST00000505534 TXNRD2Q9NNW7 524 aa20.75■□□□□ 0.91
DDR1-257ENST00000505534 MYO5AQ9Y4I1 1855 aaKnown RBP20.75■□□□□ 0.91
DDR1-257ENST00000505534 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
DDR1-257ENST00000505534 PDE3AQ14432 1141 aa20.74■□□□□ 0.91
DDR1-257ENST00000505534 NAA16Q6N069 864 aaPredicted RBP20.74■□□□□ 0.91
DDR1-257ENST00000505534 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
DDR1-257ENST00000505534 TGFBRAP1Q8WUH2 860 aa20.74■□□□□ 0.91
DDR1-257ENST00000505534 AATFQ9NY61 560 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDR1-257ENST00000505534 RBPJLQ9UBG7 517 aa20.74■□□□□ 0.91
DDR1-257ENST00000505534 PFASO15067 1338 aa20.74■□□□□ 0.91
DDR1-257ENST00000505534 CUL9Q8IWT3 2517 aa20.73■□□□□ 0.91
DDR1-257ENST00000505534 MAST2Q6P0Q8 1798 aa20.73■□□□□ 0.91
DDR1-257ENST00000505534 ZKSCAN1P17029 563 aaPredicted RBP20.73■□□□□ 0.91
DDR1-257ENST00000505534 CCAR1Q8IX12 1150 aaKnown RBP20.73■□□□□ 0.91
DDR1-257ENST00000505534 CRACR2BQ8N4Y2 399 aaPredicted RBP20.73■□□□□ 0.91
DDR1-257ENST00000505534 USP6NLQ92738 828 aa20.73■□□□□ 0.91
DDR1-257ENST00000505534 TRIM34Q9BYJ4 488 aa20.73■□□□□ 0.91
DDR1-257ENST00000505534 UBE2OQ9C0C9 1292 aaKnown RBP20.73■□□□□ 0.91
DDR1-257ENST00000505534 PEX10O60683 326 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 GNAI2P04899 355 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 COL6A1P12109 1028 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 ERVK-9P63128 1117 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 ERVK-24P63145 666 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 JAG1P78504 1218 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 CACNB2Q08289 660 aaPredicted RBP20.72■□□□□ 0.91
DDR1-257ENST00000505534 Q3C1V9 767 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 MAPKAPK5Q8IW41 473 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 DNAJC18Q9H819 358 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 STXBP5LQ9Y2K9 1186 aa20.72■□□□□ 0.91
DDR1-257ENST00000505534 MYH1P12882 1939 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 IGSF3O75054 1194 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 RGS2P41220 211 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 Q7L0L9 218 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 GPR142Q7Z601 462 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 MTMR10Q9NXD2 777 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 ZBTB21Q9ULJ3 1066 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 FLT1P17948 1338 aa20.71■□□□□ 0.91
DDR1-257ENST00000505534 FRMPD3Q5JV73 1810 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 PNMA6EA0A0J9YXQ4 647 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 GDF11O95390 407 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 MORN1Q5T089 497 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 LHX8Q68G74 356 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 PLEKHH3Q7Z736 793 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 PORCNQ9H237 461 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 GPR108Q9NPR9 543 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 SNRKQ9NRH2 765 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 PALD1Q9ULE6 856 aa20.7■□□□□ 0.9
DDR1-257ENST00000505534 IPO8O15397 1037 aaKnown RBP20.69■□□□□ 0.9
DDR1-257ENST00000505534 HLA-DOAP06340 250 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 CCND3P30281 292 aaPredicted RBP20.69■□□□□ 0.9
DDR1-257ENST00000505534 SHROOM1Q2M3G4 852 aaPredicted RBP20.69■□□□□ 0.9
DDR1-257ENST00000505534 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 USP17L2Q6R6M4 530 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 APBA2Q99767 749 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 PAGR1Q9BTK6 254 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
DDR1-257ENST00000505534 CCL14Q16627 93 aa20.68■□□□□ 0.9
DDR1-257ENST00000505534 ADGRA1Q86SQ6 560 aa20.68■□□□□ 0.9
DDR1-257ENST00000505534 DNAH12Q6ZR08 3092 aa20.68■□□□□ 0.9
DDR1-257ENST00000505534 CYP2E1P05181 493 aaPredicted RBP20.67■□□□□ 0.9
DDR1-257ENST00000505534 LRRC26Q2I0M4 334 aa20.67■□□□□ 0.9
DDR1-257ENST00000505534 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
DDR1-257ENST00000505534 CWC22Q9HCG8 908 aaKnown RBP20.67■□□□□ 0.9
DDR1-257ENST00000505534 RABGAP1Q9Y3P9 1069 aa20.67■□□□□ 0.9
DDR1-257ENST00000505534 GLRX3O76003 335 aaKnown RBP20.66■□□□□ 0.9
DDR1-257ENST00000505534 MAP2K5Q13163 448 aa20.66■□□□□ 0.9
DDR1-257ENST00000505534 TNNI3KQ59H18 835 aa20.66■□□□□ 0.9
DDR1-257ENST00000505534 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
DDR1-257ENST00000505534 ZNF512BQ96KM6 892 aaPredicted RBP20.66■□□□□ 0.9
DDR1-257ENST00000505534 C12orf42Q96LP6 360 aa20.66■□□□□ 0.9
DDR1-257ENST00000505534 SAP30BPQ9UHR5 308 aaKnown RBP20.66■□□□□ 0.9
DDR1-257ENST00000505534 FPGT-TNNI3KV9GXZ4 949 aa20.66■□□□□ 0.9
DDR1-257ENST00000505534 USP17L15C9J2P7 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L13C9JLJ4 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L11C9JVI0 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L18D6R9N7 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L22D6RA61 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L17D6RBQ6 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L19D6RCP7 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L20D6RJB6 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 GH2P01242 217 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 TRIM27P14373 513 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 CCNA1P78396 465 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 USP17L24Q0WX57 530 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 MFSD14CQ5VZR4 134 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms