RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 ARFGAP3Q9NP61 516 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
UBE3D-206ENST00000505226 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 GOLGA6L9A6NEM1 432 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 PDE8BO95263 885 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-206ENST00000505226 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
UBE3D-206ENST00000505226 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 GSG1L2A8MUP6 293 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 PATL2C9JE40 543 aaKnown RBP13.57□□□□□ -0.24
UBE3D-206ENST00000505226 MBD4O95243 580 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 TXLNAP40222 546 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 PLCD1P51178 756 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 TTF1Q15361 905 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-206ENST00000505226 ALX1Q15699 326 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 LONRF2Q1L5Z9 754 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
UBE3D-206ENST00000505226 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
UBE3D-206ENST00000505226 AKR1B15C9JRZ8 316 aaPredicted RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 PBX1P40424 430 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 AFMP43652 599 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 TOM1L2Q6ZVM7 507 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 GOLGA1Q92805 767 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 PNKPQ96T60 521 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 CTSWP56202 376 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 DPYDQ12882 1025 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 CUL4BQ13620 913 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
UBE3D-206ENST00000505226 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 NAPBQ9H115 298 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 SUGCTQ9HAC7 445 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
UBE3D-206ENST00000505226 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
UBE3D-206ENST00000505226 MAP2K7O14733 419 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 CCDC175P0C221 793 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 IGSF22Q8N9C0 903 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
UBE3D-206ENST00000505226 ADD3Q9UEY8 706 aaKnown RBP13.55□□□□□ -0.24
UBE3D-206ENST00000505226 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
UBE3D-206ENST00000505226 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 RTN1Q16799 776 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
UBE3D-206ENST00000505226 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
UBE3D-206ENST00000505226 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 ATF3P18847 181 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-206ENST00000505226 FXR1P51114 621 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 RASGRF1Q13972 1273 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBE3D-206ENST00000505226 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CHD4Q14839 1912 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 NID2Q14112 1375 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 ANKRD18BA2A2Z9 1011 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CASP14P31944 242 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 GIGYF2Q6Y7W6 1299 aaKnown RBP13.54□□□□□ -0.24
UBE3D-206ENST00000505226 SRGAP1Q7Z6B7 1085 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 LCORLQ8N3X6 602 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 TBC1D2BQ9UPU7 963 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 GYPCP04921 128 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 FGFR2P21802 821 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 STAMQ92783 540 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
UBE3D-206ENST00000505226 CCDC151A5D8V7 595 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 IRS4O14654 1257 aaPredicted RBP13.53□□□□□ -0.24
UBE3D-206ENST00000505226 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
UBE3D-206ENST00000505226 CDC25AP30304 524 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 WASF1Q92558 559 aa13.53□□□□□ -0.24
UBE3D-206ENST00000505226 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
UBE3D-206ENST00000505226 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms