RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TBCAO75347 108 aaKnown RBP15.99■□□□□ 0.15
TCOF1-207ENST00000504761 RMND1Q9NWS8 449 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 URI1O94763 535 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-207ENST00000504761 RBM6P78332 1123 aaKnown RBP15.99■□□□□ 0.15
TCOF1-207ENST00000504761 PPP2R5BQ15173 497 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 SYCP3Q8IZU3 236 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 CYP2D6P10635 497 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 CACNB3P54284 484 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
TCOF1-207ENST00000504761 BIN2Q9UBW5 565 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-207ENST00000504761 PSMA7O14818 248 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 SKILP12757 684 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 PTGS1P23219 599 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 FNBP4Q8N3X1 1017 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-207ENST00000504761 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
TCOF1-207ENST00000504761 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-207ENST00000504761 TBC1D10CQ8IV04 446 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 HOMER2Q9NSB8 354 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 CLIC4Q9Y696 253 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-207ENST00000504761 KIF20AO95235 890 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 GPS2Q13227 327 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 SMCO2A6NFE2 343 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 C21orf2O43822 256 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 GSDMDP57764 484 aa15.98■□□□□ 0.15
TCOF1-207ENST00000504761 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-207ENST00000504761 CHMP2AO43633 222 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 FGFR1OPO95684 399 aaKnown RBP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 TRAF1Q13077 416 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 FAM84BQ96KN1 310 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 ZNF408Q9H9D4 720 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 REREQ9P2R6 1566 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 CUTAO60888 179 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 CFBP00751 764 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 NONOQ15233 471 aaKnown RBP eCLIP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 ZNF445P59923 1031 aa15.97■□□□□ 0.15
TCOF1-207ENST00000504761 CERKLQ49MI3 558 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
TCOF1-207ENST00000504761 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 SPICE1Q8N0Z3 855 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.96■□□□□ 0.15
TCOF1-207ENST00000504761 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 SPA17Q15506 151 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 INF2Q27J81 1249 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 ZSCAN12O43309 604 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 YEATS4O95619 227 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 CSF1RP07333 972 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 CCDC174Q6PII3 467 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 REXO1Q8N1G1 1221 aaKnown RBP15.96■□□□□ 0.15
TCOF1-207ENST00000504761 RASGRP4Q8TDF6 673 aa15.96■□□□□ 0.15
TCOF1-207ENST00000504761 A0A087WWV3 80 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.14
TCOF1-207ENST00000504761 ERCC3P19447 782 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 RAD51AP2Q09MP3 1159 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 NR5A1Q13285 461 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 CCDC181Q5TID7 509 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 CD209Q9NNX6 404 aa15.96■□□□□ 0.14
TCOF1-207ENST00000504761 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 SCG2P13521 617 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 USP8P40818 1118 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 ADCY7P51828 1080 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 BARGINQ6ZT62 677 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 KIF18AQ8NI77 898 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 KIFC2Q96AC6 838 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 TAF6LQ9Y6J9 622 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 DCCP43146 1447 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 NPR1P16066 1061 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.95■□□□□ 0.14
TCOF1-207ENST00000504761 MYOM1P52179 1685 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 PFKFB1P16118 471 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 SKIDA1Q1XH10 827 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 WWC2Q6AWC2 1192 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 SLC44A5Q8NCS7 719 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
TCOF1-207ENST00000504761 ADALQ6DHV7 355 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
TCOF1-207ENST00000504761 SH3RF3Q8TEJ3 882 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-207ENST00000504761 BLZF1Q9H2G9 400 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 PICK1Q9NRD5 415 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 GDF11O95390 407 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 MYL5Q02045 173 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 PNOCQ13519 176 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 NSMFQ6X4W1 530 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 ICA1Q05084 483 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 BLIDQ8IZY5 108 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 LRRC27Q9C0I9 530 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 SERTAD1Q9UHV2 236 aa15.94■□□□□ 0.14
TCOF1-207ENST00000504761 SERPINB13Q9UIV8 391 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms