RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 SPRED3Q2MJR0 410 aa10.27□□□□□ -0.77
UBE2B-204ENST00000504431 TRAPPC3LQ5T215 181 aa10.27□□□□□ -0.77
UBE2B-204ENST00000504431 ANKRD24Q8TF21 1146 aa10.27□□□□□ -0.77
UBE2B-204ENST00000504431 RNF19AQ9NV58 838 aa10.27□□□□□ -0.77
UBE2B-204ENST00000504431 SHPRHQ149N8 1683 aa10.27□□□□□ -0.77
UBE2B-204ENST00000504431 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.77
UBE2B-204ENST00000504431 SBNO2Q9Y2G9 1366 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 EPHA1P21709 976 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 BAG6P46379 1132 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 LINC00114Q6XXX2 140 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
UBE2B-204ENST00000504431 C8orf37Q96NL8 207 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 SH2B1Q9NRF2 756 aaPredicted RBP10.26□□□□□ -0.77
UBE2B-204ENST00000504431 RGS17Q9UGC6 210 aaPredicted RBP10.26□□□□□ -0.77
UBE2B-204ENST00000504431 AKAP2Q9Y2D5 859 aa10.26□□□□□ -0.77
UBE2B-204ENST00000504431 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
UBE2B-204ENST00000504431 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
UBE2B-204ENST00000504431 PCDH1Q08174 1060 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
UBE2B-204ENST00000504431 PRRT3Q5FWE3 981 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 VN1R5Q7Z5H4 357 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 DMRTC2Q8IXT2 367 aaPredicted RBP10.25□□□□□ -0.77
UBE2B-204ENST00000504431 C3orf58Q8NDZ4 430 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 CEP44Q9C0F1 390 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 SOX17Q9H6I2 414 aaPredicted RBP10.25□□□□□ -0.77
UBE2B-204ENST00000504431 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
UBE2B-204ENST00000504431 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 KLHL23Q8NBE8 558 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 TRIM11Q96F44 468 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 PLVAPQ9BX97 442 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 OSGEPQ9NPF4 335 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 STK17AQ9UEE5 414 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 TTF2Q9UNY4 1162 aaKnown RBP10.24□□□□□ -0.77
UBE2B-204ENST00000504431 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
UBE2B-204ENST00000504431 CD163L1Q9NR16 1453 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 ALS2Q96Q42 1657 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 LINC01387J3KSC0 135 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 ST13P50502 369 aaKnown RBP10.23□□□□□ -0.77
UBE2B-204ENST00000504431 PPP2R3AQ06190 1150 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 TRIM28Q13263 835 aaKnown RBP10.23□□□□□ -0.77
UBE2B-204ENST00000504431 ALYREFQ86V81 257 aaKnown RBP10.23□□□□□ -0.77
UBE2B-204ENST00000504431 SEC31BQ9NQW1 1179 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 AKAP12Q02952 1782 aa10.23□□□□□ -0.77
UBE2B-204ENST00000504431 KTN1Q86UP2 1357 aaKnown RBP10.23□□□□□ -0.77
UBE2B-204ENST00000504431 E9PSI1 815 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 B3GALT4O96024 378 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 ESRRAP11474 423 aaPredicted RBP10.22□□□□□ -0.77
UBE2B-204ENST00000504431 C19orf57Q0VDD7 668 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 ADAMTSL4Q6UY14 1074 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 ILDR2Q71H61 639 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 NME9Q86XW9 330 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 GPN3Q9UHW5 284 aaPredicted RBP10.22□□□□□ -0.77
UBE2B-204ENST00000504431 TTC21BQ7Z4L5 1316 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 A0A1W2PP64 1363 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 USP6P35125 1406 aa10.22□□□□□ -0.77
UBE2B-204ENST00000504431 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
UBE2B-204ENST00000504431 A0A0A0MRY4 1105 aa10.21□□□□□ -0.77
UBE2B-204ENST00000504431 UNCXA6NJT0 531 aa10.21□□□□□ -0.77
UBE2B-204ENST00000504431 FSCN2O14926 492 aa10.21□□□□□ -0.77
UBE2B-204ENST00000504431 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.77
UBE2B-204ENST00000504431 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
UBE2B-204ENST00000504431 AFF2P51816 1311 aa10.21□□□□□ -0.78
UBE2B-204ENST00000504431 CNTNAP5Q8WYK1 1306 aa10.21□□□□□ -0.78
UBE2B-204ENST00000504431 CPSF1Q10570 1443 aaKnown RBP10.21□□□□□ -0.78
UBE2B-204ENST00000504431 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 ARHGEF10O15013 1369 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 FBLN1P23142 703 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 CDC25BP30305 580 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 HNRNPUQ00839 825 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBE2B-204ENST00000504431 CHRNA2Q15822 529 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 HDGFL2Q7Z4V5 671 aaPredicted RBP10.2□□□□□ -0.78
UBE2B-204ENST00000504431 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
UBE2B-204ENST00000504431 SLC7A3Q8WY07 619 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 TMEM39AQ9NV64 488 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
UBE2B-204ENST00000504431 MON2Q7Z3U7 1717 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 SSH2Q76I76 1423 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 USP31Q70CQ4 1352 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 CTSHP09668 335 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 SETDB1Q15047 1291 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 TXNDC11Q6PKC3 985 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 SV2BQ7L1I2 683 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 TMEM87AQ8NBN3 555 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
UBE2B-204ENST00000504431 PIK3C2AO00443 1686 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 MYOM1P52179 1685 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 KIF7Q2M1P5 1343 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 SOX1O00570 391 aaPredicted RBP10.18□□□□□ -0.78
UBE2B-204ENST00000504431 SPATA31C1P0DKV0 1188 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 RLBP1P12271 317 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 ELNP15502 786 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 AP3B2Q13367 1082 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
UBE2B-204ENST00000504431 SUZ12Q15022 739 aaKnown RBP10.18□□□□□ -0.78
UBE2B-204ENST00000504431 TPTE2Q6XPS3 522 aa10.18□□□□□ -0.78
UBE2B-204ENST00000504431 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms