RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PROCA1Q8NCQ7 364 aaPredicted RBP21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 TRIM47Q96LD4 638 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 WDR18Q9BV38 432 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 TRIM34Q9BYJ4 488 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 EHD4Q9H223 541 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 SALL3Q9BXA9 1300 aa21.78■■□□□ 1.08
SH3TC1-208ENST00000504223 MBD4O95243 580 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 HDAC1Q13547 482 aaPredicted RBP21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 TATDN1Q6P1N9 297 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 PI4K2BQ8TCG2 481 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 AS3MTQ9HBK9 375 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 GINM1Q9NU53 330 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 ZBTB21Q9ULJ3 1066 aa21.77■■□□□ 1.08
SH3TC1-208ENST00000504223 PSMC4P43686 418 aa21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 HMGCS2P54868 508 aa21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 UBE3CQ15386 1083 aa21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 CRNKL1Q9BZJ0 848 aaKnown RBP21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 DCP1AQ9NPI6 582 aaPredicted RBP21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 SERPINB13Q9UIV8 391 aa21.76■■□□□ 1.07
SH3TC1-208ENST00000504223 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 CYP2D6P10635 497 aa21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 PRMT2P55345 433 aa21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 TTC6Q86TZ1 520 aa21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 ZNF333Q96JL9 665 aa21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 PUS7LQ9H0K6 701 aaKnown RBP21.75■■□□□ 1.07
SH3TC1-208ENST00000504223 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 SHMT1P34896 483 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 BACE1P56817 501 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 GABPAQ06546 454 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 MTMR2Q13614 643 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 KBTBD3Q8NAB2 608 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 SRRDQ9UH36 339 aa21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 SUPT16HQ9Y5B9 1047 aaKnown RBP21.74■■□□□ 1.07
SH3TC1-208ENST00000504223 OSBPP22059 807 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 SLC9C1Q4G0N8 1177 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 SMCR8Q8TEV9 937 aaPredicted RBP21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 GPATCH3Q96I76 525 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 MCM9Q9NXL9 1143 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 PNMA3Q9UL41 463 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 KIAA0100Q14667 2235 aaKnown RBP21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 TTC41PQ6P2S7 1318 aa21.73■■□□□ 1.07
SH3TC1-208ENST00000504223 POTEFA5A3E0 1075 aa21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 FMNL1O95466 1100 aaPredicted RBP21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 MGAMO43451 1857 aa21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 MYH8P13535 1937 aa21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 DOCK3Q8IZD9 2030 aa21.72■■□□□ 1.07
SH3TC1-208ENST00000504223 CYP2D7A0A087X1C5 515 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 GH2P01242 217 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 POLR3DP05423 398 aaPredicted RBP21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 MX1P20591 662 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 FCGRTP55899 365 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 SLC44A5Q8NCS7 719 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 OSBP2Q969R2 916 aa21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 RBBP6Q7Z6E9 1792 aaKnown RBP21.71■■□□□ 1.07
SH3TC1-208ENST00000504223 MKI67P46013 3256 aaKnown RBP21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 C19orf81C9J6K1 198 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 USP17L10C9JJH3 530 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 IGHDP01880 384 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 HOXD10P28358 340 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 PABPC4Q13310 644 aaKnown RBP eCLIP21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 NBPF11Q86T75 865 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 SH3TC2Q8TF17 1288 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 GCC1Q96CN9 775 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 DYNLL2Q96FJ2 89 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 ASCC2Q9H1I8 757 aaPredicted RBP21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 MYPNQ86TC9 1320 aa21.7■■□□□ 1.06
SH3TC1-208ENST00000504223 HOXA7P31268 230 aaPredicted RBP21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 GUCY1A2P33402 732 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 PRKCZQ05513 592 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 AAMPQ13685 434 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 FAM110CQ1W6H9 321 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 ZSCAN25Q6NSZ9 544 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 ANKRD13CQ8N6S4 541 aa21.69■■□□□ 1.06
SH3TC1-208ENST00000504223 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 GLRX3O76003 335 aaKnown RBP21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 GCLCP48506 637 aaPredicted RBP21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 ABCB5Q2M3G0 1257 aa21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 STRBPQ96SI9 672 aaKnown RBP21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 ATP8A2Q9NTI2 1148 aa21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 TMOD4Q9NZQ9 345 aa21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 SLC4A4Q9Y6R1 1079 aa21.68■■□□□ 1.06
SH3TC1-208ENST00000504223 M0R2C6 588 aa21.67■■□□□ 1.06
SH3TC1-208ENST00000504223 APPBP2Q92624 585 aa21.67■■□□□ 1.06
SH3TC1-208ENST00000504223 USP17L12C9JPN9 530 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 USP17L21D6R901 530 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 ERC2O15083 957 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 C12orf60Q5U649 245 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 RAET1EQ8TD07 263 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 SEC62Q99442 399 aaKnown RBP21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 STAP2Q9UGK3 403 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 GABRQQ9UN88 632 aa21.66■■□□□ 1.06
SH3TC1-208ENST00000504223 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
SH3TC1-208ENST00000504223 PDE1AP54750 535 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms