RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 ZNF274Q96GC6 653 aaPredicted RBP17.69■□□□□ 0.42
SGCA-204ENST00000504073 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
SGCA-204ENST00000504073 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 CSRNP1Q96S65 589 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
SGCA-204ENST00000504073 HACL1Q9UJ83 578 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 PPP2R3BQ9Y5P8 575 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 GLTPD2A6NH11 291 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 NBPF9Q3BBW0 867 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 SAMD7Q7Z3H4 446 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 DYNLL2Q96FJ2 89 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
SGCA-204ENST00000504073 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
SGCA-204ENST00000504073 CWC22Q9HCG8 908 aaKnown RBP17.68■□□□□ 0.42
SGCA-204ENST00000504073 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
SGCA-204ENST00000504073 MYH8P13535 1937 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
SGCA-204ENST00000504073 PRDM1O75626 825 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
SGCA-204ENST00000504073 CALM1P0DP23 149 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 CALM2P0DP24 149 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 CALM3P0DP25 149 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 RCAN1P53805 252 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 TFAP4Q01664 338 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
SGCA-204ENST00000504073 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
SGCA-204ENST00000504073 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 PITPNM2Q9BZ72 1349 aa17.67■□□□□ 0.42
SGCA-204ENST00000504073 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
SGCA-204ENST00000504073 ANTXR2P58335 489 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 GABPAQ06546 454 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
SGCA-204ENST00000504073 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
SGCA-204ENST00000504073 CABP5Q9NP86 173 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 TNKSO95271 1327 aa17.66■□□□□ 0.42
SGCA-204ENST00000504073 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 RASA1P20936 1047 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 EVCP57679 992 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 CUL4AQ13619 759 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 DCAF15Q66K64 600 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 TPCN1Q9ULQ1 816 aa17.65■□□□□ 0.42
SGCA-204ENST00000504073 DDTLA6NHG4 134 aaPredicted RBP17.64■□□□□ 0.41
SGCA-204ENST00000504073 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 CPLX1O14810 134 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 FOXN1O15353 648 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 ZBTB43O43298 467 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 TBC1D12O60347 775 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 PFKFB2O60825 505 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 CDKL5O76039 1030 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 EPS15P42566 896 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 RASA3Q14644 834 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
SGCA-204ENST00000504073 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
SGCA-204ENST00000504073 IGDCC4Q8TDY8 1250 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
SGCA-204ENST00000504073 KAT14Q9H8E8 782 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.64■□□□□ 0.41
SGCA-204ENST00000504073 INCENPQ9NQS7 918 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
SGCA-204ENST00000504073 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 MPHOSPH10O00566 681 aaKnown RBP17.63■□□□□ 0.41
SGCA-204ENST00000504073 DDAH1O94760 285 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 ME3Q16798 604 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 FAM47AQ5JRC9 791 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 ANGEL2Q5VTE6 544 aaKnown RBP17.63■□□□□ 0.41
SGCA-204ENST00000504073 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
SGCA-204ENST00000504073 SULF1Q8IWU6 871 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
SGCA-204ENST00000504073 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
SGCA-204ENST00000504073 PLIN4Q96Q06 1357 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 SCN4AP35499 1836 aa17.63■□□□□ 0.41
SGCA-204ENST00000504073 EPHX2P34913 555 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 METAP2P50579 478 aaKnown RBP eCLIP17.62■□□□□ 0.41
SGCA-204ENST00000504073 HMGN5P82970 282 aaKnown RBP17.62■□□□□ 0.41
SGCA-204ENST00000504073 TMEM179Q6ZVK1 233 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 ZFPM1Q8IX07 1006 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 TRPM4Q8TD43 1214 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 ANKS1AQ92625 1134 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 DEFB129Q9H1M3 183 aa17.62■□□□□ 0.41
SGCA-204ENST00000504073 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms