RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 AKAP11Q9UKA4 1901 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 PPIP5K2O43314 1243 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 IL1R1P14778 569 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 ELF1P32519 619 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 IMPDH2P12268 514 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 GYG1P46976 350 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 CCNHP51946 323 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 CCDC102BQ68D86 513 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-207ENST00000503974 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 CDKL5O76039 1030 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 HIBADHP31937 336 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 PHKA1P46020 1223 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 BCAMP50895 628 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 PODNQ7Z5L7 613 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 ARMC2Q8NEN0 867 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 NEUROD6Q96NK8 337 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 UBXN6Q9BZV1 441 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 TRIM6Q9C030 488 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 CD209Q9NNX6 404 aa11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 SPATS2LQ9NUQ6 558 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-207ENST00000503974 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 RIMBP2O15034 1052 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 SEMA3EO15041 775 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 AP1G2O75843 785 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 ACTN2P35609 894 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 MNAT1P51948 309 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 CRYMQ14894 314 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 RBBP5Q15291 538 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 RBM12BQ8IXT5 1001 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 MICAL1Q8TDZ2 1067 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 STAP2Q9UGK3 403 aa11.02□□□□□ -0.64
PDLIM5-207ENST00000503974 TTC41PQ6P2S7 1318 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 YDJCA8MPS7 323 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 FZD9O00144 591 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 ECE2O60344 883 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 RTN2O75298 545 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 USP8P40818 1118 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 RHBDL3P58872 404 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 PDIA5Q14554 519 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 C16orf71Q8IYS4 520 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 CCDC112Q8NEF3 446 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 OTUD7AQ8TE49 926 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 KIF2CQ99661 725 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 FAM205AQ6ZU69 1335 aa11.02□□□□□ -0.65
PDLIM5-207ENST00000503974 EME2A4GXA9 379 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 CCDC158Q5M9N0 1113 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 REXO1L1PQ8IX06 675 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 NIM1KQ8IY84 436 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 DBNDD1Q9H9R9 158 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 ZNRF3Q9ULT6 936 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 DOCK2Q92608 1830 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 AOX1Q06278 1338 aa11.01□□□□□ -0.65
PDLIM5-207ENST00000503974 RPS6KA5O75582 802 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 BRD1O95696 1058 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 ATP5JP18859 108 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 MX1P20591 662 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 RASGRF1Q13972 1273 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 ZRSR1Q15695 479 aaKnown RBP11□□□□□ -0.65
PDLIM5-207ENST00000503974 DOK7Q18PE1 504 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 RNF20Q5VTR2 975 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 HHATQ5VTY9 493 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 LRRC31Q6UY01 552 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 JDP2Q8WYK2 163 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 CRACR2AQ9BSW2 395 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 ECHDC1Q9NTX5 307 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 MCM8Q9UJA3 840 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 PNMA6AP0CW24 399 aaPredicted RBP11□□□□□ -0.65
PDLIM5-207ENST00000503974 H2AFXP16104 143 aaPredicted RBP11□□□□□ -0.65
PDLIM5-207ENST00000503974 MCAMP43121 646 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 PDE1AP54750 535 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 NEDD9Q14511 834 aa11□□□□□ -0.65
PDLIM5-207ENST00000503974 GORABQ5T7V8 394 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms