RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 UBXN2AP68543 259 aa14.51□□□□□ -0.09
MED28-203ENST00000503945 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
MED28-203ENST00000503945 CCDC84Q86UT8 332 aaPredicted RBP14.51□□□□□ -0.09
MED28-203ENST00000503945 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
MED28-203ENST00000503945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.51□□□□□ -0.09
MED28-203ENST00000503945 RBM27Q9P2N5 1060 aaKnown RBP14.51□□□□□ -0.09
MED28-203ENST00000503945 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.51□□□□□ -0.09
MED28-203ENST00000503945 AGTPBP1Q9UPW5 1226 aa14.51□□□□□ -0.09
MED28-203ENST00000503945 MAGEB6P1A0A0J9YX57 407 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 C19orf81C9J6K1 198 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 ADCY3O60266 1144 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 FLT3LGP49771 235 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 RRP1BQ14684 758 aaKnown RBP14.5□□□□□ -0.09
MED28-203ENST00000503945 C20orf194Q5TEA3 1177 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 DNAJC2Q99543 621 aaKnown RBP14.5□□□□□ -0.09
MED28-203ENST00000503945 WDR18Q9BV38 432 aa14.5□□□□□ -0.09
MED28-203ENST00000503945 COL2A1P02458 1487 aaPredicted RBP14.5□□□□□ -0.09
MED28-203ENST00000503945 DOCK1Q14185 1865 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 GOLIM4O00461 696 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 SGPL1O95470 568 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 ELNP15502 786 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 HMGCS2P54868 508 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 BACE1P56817 501 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 U2AF1L4Q8WU68 220 aaKnown RBP14.49□□□□□ -0.09
MED28-203ENST00000503945 HTATIP2Q9BUP3 242 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 TMOD4Q9NZQ9 345 aa14.49□□□□□ -0.09
MED28-203ENST00000503945 USP17L10C9JJH3 530 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
MED28-203ENST00000503945 ATP5JP18859 108 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
MED28-203ENST00000503945 SH3D19Q5HYK7 790 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 TREML2Q5T2D2 321 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 ANKRD13CQ8N6S4 541 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 LRRCC1Q9C099 1032 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 BOLA2Q9H3K6 86 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
MED28-203ENST00000503945 TNPO2O14787 897 aaKnown RBP14.47□□□□□ -0.09
MED28-203ENST00000503945 FARP2O94887 1054 aaPredicted RBP14.47□□□□□ -0.09
MED28-203ENST00000503945 GDF11O95390 407 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 TFRCP02786 760 aaKnown RBP14.47□□□□□ -0.09
MED28-203ENST00000503945 INHAP05111 366 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 PDE6AP16499 860 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 PXYLP1Q8TE99 480 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 COA7Q96BR5 231 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 CRNKL1Q9BZJ0 848 aaKnown RBP14.47□□□□□ -0.09
MED28-203ENST00000503945 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.47□□□□□ -0.09
MED28-203ENST00000503945 PRO3102Q9H379 93 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 CABP5Q9NP86 173 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
MED28-203ENST00000503945 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 JAG1P78504 1218 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 IRF5Q13568 498 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 MTMR2Q13614 643 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 CERKLQ49MI3 558 aaPredicted RBP14.46□□□□□ -0.09
MED28-203ENST00000503945 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 RIOK1Q9BRS2 568 aaKnown RBP14.46□□□□□ -0.09
MED28-203ENST00000503945 ASCC2Q9H1I8 757 aaPredicted RBP14.46□□□□□ -0.09
MED28-203ENST00000503945 EHD4Q9H223 541 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 DNAJC18Q9H819 358 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 NR2E3Q9Y5X4 410 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 SZT2Q5T011 3432 aa14.46□□□□□ -0.09
MED28-203ENST00000503945 GH2P01242 217 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 HOXA7P31268 230 aaPredicted RBP14.45□□□□□ -0.1
MED28-203ENST00000503945 PLCD1P51178 756 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 IRX3P78415 501 aaPredicted RBP14.45□□□□□ -0.1
MED28-203ENST00000503945 DEFB118Q96PH6 123 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 HAUS7Q99871 368 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 ZBTB21Q9ULJ3 1066 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
MED28-203ENST00000503945 SMARCA5O60264 1052 aaPredicted RBP14.44□□□□□ -0.1
MED28-203ENST00000503945 RAB3GAP1Q15042 981 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 ABCB5Q2M3G0 1257 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 P2RX7Q99572 595 aaKnown RBP14.44□□□□□ -0.1
MED28-203ENST00000503945 ALPK3Q96L96 1907 aa14.44□□□□□ -0.1
MED28-203ENST00000503945 TCRBV5S4A2TA0A5A2 114 aa14.43□□□□□ -0.1
MED28-203ENST00000503945 CCAR1Q8IX12 1150 aaKnown RBP14.43□□□□□ -0.1
MED28-203ENST00000503945 GPRC5AQ8NFJ5 357 aa14.43□□□□□ -0.1
MED28-203ENST00000503945 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
MED28-203ENST00000503945 DDRGK1Q96HY6 314 aa14.43□□□□□ -0.1
MED28-203ENST00000503945 PAK6Q9NQU5 681 aaPredicted RBP14.43□□□□□ -0.1
MED28-203ENST00000503945 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
MED28-203ENST00000503945 EVI5O60447 810 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 ADD2P35612 726 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 USP14P54578 494 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 UBE3CQ15386 1083 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 SHROOM1Q2M3G4 852 aaPredicted RBP14.42□□□□□ -0.1
MED28-203ENST00000503945 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 GPATCH3Q96I76 525 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 PAWRQ96IZ0 340 aaKnown RBP14.42□□□□□ -0.1
MED28-203ENST00000503945 FEZ1Q99689 392 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 CRISPLD2Q9H0B8 497 aa14.42□□□□□ -0.1
MED28-203ENST00000503945 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
MED28-203ENST00000503945 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms