RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 SLITRK5O94991 958 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 MAPK1P28482 360 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 CIAPIN1Q6FI81 312 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 ATG14Q6ZNE5 492 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 C12orf40Q86WS4 652 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 ALPK1Q96QP1 1244 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 AKAP2Q9Y2D5 859 aa7.63□□□□□ -1.19
UBE3D-205ENST00000503942 TCAF2A6NFQ2 919 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 H3BS24 57 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 TRIM37O94972 964 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 GLDCP23378 1020 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 CDKAL1Q5VV42 579 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 GRIN3AQ8TCU5 1115 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 ASB16Q96NS5 453 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 NECAB3Q96P71 396 aaPredicted RBP7.62□□□□□ -1.19
UBE3D-205ENST00000503942 RBCK1Q9BYM8 510 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 KCNK12Q9HB15 430 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 CAPN6Q9Y6Q1 641 aa7.62□□□□□ -1.19
UBE3D-205ENST00000503942 ANKRD33BA6NCL7 494 aa7.61□□□□□ -1.19
UBE3D-205ENST00000503942 CTSWP56202 376 aa7.61□□□□□ -1.19
UBE3D-205ENST00000503942 THAP5Q7Z6K1 395 aa7.61□□□□□ -1.19
UBE3D-205ENST00000503942 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
UBE3D-205ENST00000503942 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 ETV2O00321 342 aaPredicted RBP7.6□□□□□ -1.19
UBE3D-205ENST00000503942 RAC2P15153 192 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 TMC7Q7Z402 723 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 C3orf58Q8NDZ4 430 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 ABHD4Q8TB40 342 aa7.6□□□□□ -1.19
UBE3D-205ENST00000503942 TPX2Q9ULW0 747 aaKnown RBP7.6□□□□□ -1.19
UBE3D-205ENST00000503942 ENC1O14682 589 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 ERCC3P19447 782 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 BMP6P22004 513 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 LINC00310P59036 64 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 FGD1P98174 961 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 NXPE4Q6UWF7 544 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 ZNF507Q8TCN5 953 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 SMG5Q9UPR3 1016 aaKnown RBP7.59□□□□□ -1.19
UBE3D-205ENST00000503942 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
UBE3D-205ENST00000503942 PAGE1O75459 146 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 SCARA3Q6AZY7 606 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 LLGL2Q6P1M3 1020 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 ZSCAN29Q8IWY8 852 aaPredicted RBP7.58□□□□□ -1.2
UBE3D-205ENST00000503942 ZNF428Q96B54 188 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 SLC26A8Q96RN1 970 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 MIPEPQ99797 713 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 SLAMF8Q9P0V8 285 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 PCDHA4Q9UN74 947 aa7.58□□□□□ -1.2
UBE3D-205ENST00000503942 NUAK1O60285 661 aa7.57□□□□□ -1.2
UBE3D-205ENST00000503942 SRFP11831 508 aa7.57□□□□□ -1.2
UBE3D-205ENST00000503942 HOXA5P20719 270 aa7.57□□□□□ -1.2
UBE3D-205ENST00000503942 SLBPQ14493 270 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE3D-205ENST00000503942 TTC6Q86TZ1 520 aa7.57□□□□□ -1.2
UBE3D-205ENST00000503942 FBRSQ9HAH7 460 aa7.57□□□□□ -1.2
UBE3D-205ENST00000503942 TREHO43280 583 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 CAP2P40123 477 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 DSC3Q14574 896 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBE3D-205ENST00000503942 TPTE2Q6XPS3 522 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 ELMO3Q96BJ8 720 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 CEP44Q9C0F1 390 aa7.56□□□□□ -1.2
UBE3D-205ENST00000503942 LRRC14Q15048 493 aa7.55□□□□□ -1.2
UBE3D-205ENST00000503942 RASIP1Q5U651 963 aa7.55□□□□□ -1.2
UBE3D-205ENST00000503942 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
UBE3D-205ENST00000503942 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
UBE3D-205ENST00000503942 TMEM59LQ9UK28 342 aa7.55□□□□□ -1.2
UBE3D-205ENST00000503942 DNAJC25-GNG10A0A024R161 153 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 RBM47A0AV96 593 aaKnown RBP7.54□□□□□ -1.2
UBE3D-205ENST00000503942 RALGPS1Q5JS13 557 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 FBXO33Q7Z6M2 555 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 MYLIPQ8WY64 445 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 KCNN1Q92952 543 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 PPM1HQ9ULR3 514 aa7.54□□□□□ -1.2
UBE3D-205ENST00000503942 PRAMEF27A3QJZ7 478 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 HPXP02790 462 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
UBE3D-205ENST00000503942 GSTT1P30711 240 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 ERVFC1P60507 584 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
UBE3D-205ENST00000503942 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
UBE3D-205ENST00000503942 INPP5AQ14642 412 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 NKG7Q16617 165 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 COX4I2Q96KJ9 171 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 ZSWIM5Q9P217 1185 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 JAG2Q9Y219 1238 aa7.53□□□□□ -1.2
UBE3D-205ENST00000503942 CBX7O95931 251 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 ESR1P03372 595 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 RIN3Q8TB24 985 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 RELTQ969Z4 430 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 BCL2L13Q9BXK5 485 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 IRF2BPLQ9H1B7 796 aa7.52□□□□□ -1.21
UBE3D-205ENST00000503942 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms