RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 BACE1P56817 501 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
PROM1-204ENST00000503884 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
PROM1-204ENST00000503884 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
PROM1-204ENST00000503884 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 FLT1P17948 1338 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 COL6A3P12111 3177 aa11.04□□□□□ -0.64
PROM1-204ENST00000503884 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
PROM1-204ENST00000503884 ASNSP08243 561 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 PLCG2P16885 1265 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PROM1-204ENST00000503884 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
PROM1-204ENST00000503884 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 MAPKAPK5Q8IW41 473 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.03□□□□□ -0.64
PROM1-204ENST00000503884 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
PROM1-204ENST00000503884 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
PROM1-204ENST00000503884 NR2E3Q9Y5X4 410 aa11.03□□□□□ -0.64
PROM1-204ENST00000503884 C19orf81C9J6K1 198 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 HMGCRP04035 888 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 ZAP70P43403 619 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 TRIM32Q13049 653 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 MTMR2Q13614 643 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 MAP3K21Q5TCX8 1036 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
PROM1-204ENST00000503884 P2RX7Q99572 595 aaKnown RBP11.02□□□□□ -0.65
PROM1-204ENST00000503884 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
PROM1-204ENST00000503884 PALD1Q9ULE6 856 aa11.02□□□□□ -0.65
PROM1-204ENST00000503884 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 RLBP1P12271 317 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 DIS3LQ8TF46 1054 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 TRIB2Q92519 343 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 USP6NLQ92738 828 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 EAF2Q96CJ1 260 aaPredicted RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 NOL10Q9BSC4 688 aaKnown RBP11.01□□□□□ -0.65
PROM1-204ENST00000503884 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 RPTORQ8N122 1335 aa11.01□□□□□ -0.65
PROM1-204ENST00000503884 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
PROM1-204ENST00000503884 EVI5O60447 810 aa11□□□□□ -0.65
PROM1-204ENST00000503884 PEX10O60683 326 aa11□□□□□ -0.65
PROM1-204ENST00000503884 GDF11O95390 407 aa11□□□□□ -0.65
PROM1-204ENST00000503884 XRCC5P13010 732 aaKnown RBP11□□□□□ -0.65
PROM1-204ENST00000503884 HERVK_113P62684 666 aa11□□□□□ -0.65
PROM1-204ENST00000503884 Q3C1V9 767 aa11□□□□□ -0.65
PROM1-204ENST00000503884 TATDN1Q6P1N9 297 aa11□□□□□ -0.65
PROM1-204ENST00000503884 C12orf42Q96LP6 360 aa11□□□□□ -0.65
PROM1-204ENST00000503884 CCDC8Q9H0W5 538 aaPredicted RBP11□□□□□ -0.65
PROM1-204ENST00000503884 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
PROM1-204ENST00000503884 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
PROM1-204ENST00000503884 RLFQ13129 1914 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 CYP7A1P22680 504 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 IRX3P78415 501 aaPredicted RBP10.99□□□□□ -0.65
PROM1-204ENST00000503884 MORN1Q5T089 497 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 TMED8Q6PL24 325 aaPredicted RBP10.99□□□□□ -0.65
PROM1-204ENST00000503884 NECAB2Q7Z6G3 386 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 GDF15Q99988 308 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 EHD4Q9H223 541 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 HMX1Q9NP08 348 aaPredicted RBP10.99□□□□□ -0.65
PROM1-204ENST00000503884 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 NAV1Q8NEY1 1877 aa10.99□□□□□ -0.65
PROM1-204ENST00000503884 SOX1O00570 391 aaPredicted RBP10.98□□□□□ -0.65
PROM1-204ENST00000503884 CNMDO75829 334 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 ERVK-24P63145 666 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
PROM1-204ENST00000503884 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
PROM1-204ENST00000503884 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
PROM1-204ENST00000503884 NUDT12Q9BQG2 462 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 PORCNQ9H237 461 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 ANTXR1Q9H6X2 564 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
PROM1-204ENST00000503884 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 NDUFB9Q9Y6M9 179 aa10.98□□□□□ -0.65
PROM1-204ENST00000503884 GH2P01242 217 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 COL6A1P12109 1028 aa10.97□□□□□ -0.65
PROM1-204ENST00000503884 CYP2B6P20813 491 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms