RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 HMG20BQ9P0W2 317 aa19.47■□□□□ 0.71
DDR1-250ENST00000503628 RBPJLQ9UBG7 517 aa19.47■□□□□ 0.71
DDR1-250ENST00000503628 HERC5Q9UII4 1024 aaKnown RBP19.47■□□□□ 0.71
DDR1-250ENST00000503628 MAPK4P31152 587 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 JAG1P78504 1218 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 TFCP2Q12800 502 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
DDR1-250ENST00000503628 FAM109BQ6ICB4 259 aaPredicted RBP19.46■□□□□ 0.71
DDR1-250ENST00000503628 PI16Q6UXB8 463 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 TEX11Q8IYF3 940 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 FAM161BQ96MY7 647 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 AKAP2Q9Y2D5 859 aa19.46■□□□□ 0.71
DDR1-250ENST00000503628 MORN1Q5T089 497 aa19.45■□□□□ 0.7
DDR1-250ENST00000503628 NEUROD6Q96NK8 337 aa19.45■□□□□ 0.7
DDR1-250ENST00000503628 PORCNQ9H237 461 aa19.45■□□□□ 0.7
DDR1-250ENST00000503628 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
DDR1-250ENST00000503628 PI4KBQ9UBF8 816 aa19.45■□□□□ 0.7
DDR1-250ENST00000503628 ASNSP08243 561 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 RGS2P41220 211 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 ERVK-9P63128 1117 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 ERVK-24P63145 666 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 GPR142Q7Z601 462 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
DDR1-250ENST00000503628 SPATA5Q8NB90 893 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 SH3RF3Q8TEJ3 882 aaPredicted RBP19.44■□□□□ 0.7
DDR1-250ENST00000503628 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.44■□□□□ 0.7
DDR1-250ENST00000503628 SIPA1L1O43166 1804 aa19.44■□□□□ 0.7
DDR1-250ENST00000503628 EYSQ5T1H1 3165 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 SHROOM1Q2M3G4 852 aaPredicted RBP19.43■□□□□ 0.7
DDR1-250ENST00000503628 POTEEQ6S8J3 1075 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 PLEKHH3Q7Z736 793 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
DDR1-250ENST00000503628 PAGR1Q9BTK6 254 aa19.43■□□□□ 0.7
DDR1-250ENST00000503628 SENP6Q9GZR1 1112 aaPredicted RBP19.43■□□□□ 0.7
DDR1-250ENST00000503628 FRMPD3Q5JV73 1810 aa19.42■□□□□ 0.7
DDR1-250ENST00000503628 APBA2Q99767 749 aa19.42■□□□□ 0.7
DDR1-250ENST00000503628 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
DDR1-250ENST00000503628 BCAR3O75815 825 aa19.41■□□□□ 0.7
DDR1-250ENST00000503628 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
DDR1-250ENST00000503628 MEIS3Q99687 375 aa19.41■□□□□ 0.7
DDR1-250ENST00000503628 DHX36Q9H2U1 1008 aaKnown RBP19.41■□□□□ 0.7
DDR1-250ENST00000503628 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
DDR1-250ENST00000503628 GDF11O95390 407 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
DDR1-250ENST00000503628 NOL10Q9BSC4 688 aaKnown RBP19.4■□□□□ 0.7
DDR1-250ENST00000503628 EMILIN3Q9NT22 766 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 LRP2BPQ9P2M1 347 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 VCANP13611 3396 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 PRUNE2Q8WUY3 3088 aa19.4■□□□□ 0.7
DDR1-250ENST00000503628 SRGAP3O43295 1099 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 ARID4AP29374 1257 aaPredicted RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 ATN1P54259 1190 aaPredicted RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 FOXP4Q8IVH2 680 aaPredicted RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 MAPKAPK5Q8IW41 473 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 CRACR2BQ8N4Y2 399 aaPredicted RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 TGFBRAP1Q8WUH2 860 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 CWC22Q9HCG8 908 aaKnown RBP19.39■□□□□ 0.69
DDR1-250ENST00000503628 AATFQ9NY61 560 aaKnown RBP eCLIP19.39■□□□□ 0.69
DDR1-250ENST00000503628 FLRT1Q9NZU1 646 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 NDUFB9Q9Y6M9 179 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 MAST2Q6P0Q8 1798 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 CDK5RAP2Q96SN8 1893 aa19.39■□□□□ 0.69
DDR1-250ENST00000503628 MCAMP43121 646 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 ZNF697Q5TEC3 545 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 MFSD14CQ5VZR4 134 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
DDR1-250ENST00000503628 GINM1Q9NU53 330 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 ZBTB21Q9ULJ3 1066 aa19.38■□□□□ 0.69
DDR1-250ENST00000503628 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
DDR1-250ENST00000503628 BAG3O95817 575 aa19.37■□□□□ 0.69
DDR1-250ENST00000503628 CNGA1P29973 690 aa19.37■□□□□ 0.69
DDR1-250ENST00000503628 NAA16Q6N069 864 aaPredicted RBP19.37■□□□□ 0.69
DDR1-250ENST00000503628 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
DDR1-250ENST00000503628 CDX2Q99626 313 aaPredicted RBP19.37■□□□□ 0.69
DDR1-250ENST00000503628 FLT1P17948 1338 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 CNMDO75829 334 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 PLCG2P16885 1265 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 WDR78Q5VTH9 848 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 LPAR1Q92633 364 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 FRAT1Q92837 279 aaPredicted RBP19.36■□□□□ 0.69
DDR1-250ENST00000503628 PRKAG2Q9UGJ0 569 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 DDX20Q9UHI6 824 aaKnown RBP19.36■□□□□ 0.69
DDR1-250ENST00000503628 RABGAP1Q9Y3P9 1069 aa19.36■□□□□ 0.69
DDR1-250ENST00000503628 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 GLRX3O76003 335 aaKnown RBP19.35■□□□□ 0.69
DDR1-250ENST00000503628 RTP1P59025 263 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 PPP4CP60510 307 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 CCNA1P78396 465 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 ATP2B2Q01814 1243 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 SHHQ15465 462 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms