RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NCAPHQ15003 741 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 TMCO3Q6UWJ1 677 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ANKRD23Q86SG2 305 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 TMX4Q9H1E5 349 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 VRTNQ9H8Y1 702 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 POTEB2H3BUK9 544 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 SLC5A1P13866 664 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 E2F2Q14209 437 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 HSP90B2PQ58FF3 399 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 VPS53Q5VIR6 699 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 CDKAL1Q5VV42 579 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 FMNL3Q8IVF7 1028 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 DRC7Q8IY82 874 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 FAM131CQ96AQ9 280 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 DDX11Q96FC9 970 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 FMNL2Q96PY5 1086 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 DMAC2Q9NW81 257 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 USP16Q9Y5T5 823 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 BTNL10A8MVZ5 291 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 GSDMDP57764 484 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 RBM6P78332 1123 aaKnown RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 DDR1Q08345 913 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ARCQ7LC44 396 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 STRBPQ96SI9 672 aaKnown RBP3.24□□□□□ -1.89
NEDD4-204ENST00000503468 POLR3EQ9NVU0 708 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 JRKLQ9Y4A0 524 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 PTPRSQ13332 1948 aa3.24□□□□□ -1.89
NEDD4-204ENST00000503468 ITIH6Q6UXX5 1313 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ANKRD18BA2A2Z9 1011 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 PHF20L1A8MW92 1017 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 FAM189A1O60320 539 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ERLIN1O75477 346 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SLU7O95391 586 aaKnown RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 NBPF7P0C2Y1 421 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 VASPP50552 380 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 DHX37Q8IY37 1157 aaKnown RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ARHGAP28Q9P2N2 729 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 OBSL1O75147 1896 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 HTTP42858 3142 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TCRBV5S1A1TA0A578 114 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ZNF487B1APH4 448 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 RBAK-RBAKDNI3L0D1 243 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 CTDNEP1O95476 244 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 CCDC172P0C7W6 258 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 MAP2K1Q02750 393 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TUBB2AQ13885 445 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 RASA3Q14644 834 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 CCDC183Q5T5S1 534 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 PAXIP1Q6ZW49 1069 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SCML4Q8N228 414 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TMEM57Q8N5G2 664 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 UBXN4Q92575 508 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TUBB2BQ9BVA1 445 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 KCNQ5Q9NR82 932 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 RSPH14Q9UHP6 348 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 CTNNA3Q9UI47 895 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 KDM3AQ9Y4C1 1321 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TRIM6-TRIM34B2RNG4 842 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ATG7O95352 703 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 FDX1P10109 184 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 C15orf39Q6ZRI6 1047 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 GOLGA5Q8TBA6 731 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TRIM34Q9BYJ4 488 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 GGNBP2Q9H3C7 697 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 PNMA6EA0A0J9YXQ4 647 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 A0A1B0GUA9 196 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TMCO5BA8MYB1 307 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SLFN14P0C7P3 912 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 CYP2C19P33261 490 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 IRX5P78411 483 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ZSCAN23Q3MJ62 389 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 EPM2AIP1Q7L775 607 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SPATS2Q86XZ4 545 aaKnown RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 IQUBQ8NA54 791 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 NTNG2Q96CW9 530 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 LGR6Q9HBX8 967 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SH3GLB2Q9NR46 395 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 FEZ2Q9UHY8 353 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 PCDHA2Q9Y5H9 948 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 DNAJC25-GNG10A0A024R161 153 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 TTC36A6NLP5 189 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 ENTPD3O75355 529 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 IQCB1Q15051 598 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 BEND5Q7L4P6 421 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 SUGP1Q8IWZ8 645 aaKnown RBP3.23□□□□□ -1.89
NEDD4-204ENST00000503468 FAM200AQ8TCP9 573 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 DONSONQ9NYP3 566 aa3.23□□□□□ -1.89
NEDD4-204ENST00000503468 YEATS4O95619 227 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 SETSIPP0DME0 302 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 SARNPP82979 210 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 GMCL1Q96IK5 515 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 OSBPL5Q9H0X9 879 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 RC3H2Q9HBD1 1191 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 BDP1A6H8Y1 2624 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PPP1R12AO14974 1030 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MAGEA9P43362 315 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 OAZ1P54368 228 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 NBPF9Q3BBW0 867 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 WDR45BQ5MNZ6 344 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms