RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 MYH1P12882 1939 aa21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 GDF11O95390 407 aa21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 GSPT1P15170 499 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 FAM227BQ96M60 508 aa21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 SWAP70Q9UH65 585 aa21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
PDLIM7-209ENST00000503346 DOCK1Q14185 1865 aa21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 A0A0G2JLL6 359 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 USP17L5A8MUK1 530 aa21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 SDSP20132 328 aa21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 MOGSQ13724 837 aa21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 CERKLQ49MI3 558 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 MCMDC2Q4G0Z9 681 aa21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 PRRT2Q7Z6L0 340 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 CCDC84Q86UT8 332 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 ZCCHC17Q9NP64 241 aaKnown RBP21.83■■□□□ 1.09
PDLIM7-209ENST00000503346 CYP2D7A0A087X1C5 515 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 A0A0D9SFI3 127 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 BTBD19C9JJ37 291 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 TBC1D8O95759 1140 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 NMIQ13287 307 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 SHROOM1Q2M3G4 852 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 CCDC129Q6ZRS4 1044 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 IFNL3Q8IZI9 196 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 FAM43AQ8N2R8 423 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 ZNF280CQ8ND82 737 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 DYNLL2Q96FJ2 89 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 CCDC136Q96JN2 1154 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 WDR18Q9BV38 432 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 NACAP1Q9BZK3 213 aa21.82■■□□□ 1.08
PDLIM7-209ENST00000503346 TRIM75PA6NK02 468 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 SMIM22K7EJ46 135 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 GH2P01242 217 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 APPP05067 770 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 TDO2P48775 406 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 NOM1Q5C9Z4 860 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 C16orf86Q6ZW13 317 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 SLC44A5Q8NCS7 719 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 AS3MTQ9HBK9 375 aa21.81■■□□□ 1.08
PDLIM7-209ENST00000503346 HIP1O00291 1037 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 FOXP2O15409 715 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 SPP2Q13103 211 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 ABCB5Q2M3G0 1257 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 FASTKD5Q7L8L6 764 aaKnown RBP21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 ANKRD23Q86SG2 305 aa21.8■■□□□ 1.08
PDLIM7-209ENST00000503346 ROBO3Q96MS0 1386 aa21.79■■□□□ 1.08
PDLIM7-209ENST00000503346 R3HDMLQ9H3Y0 253 aa21.79■■□□□ 1.08
PDLIM7-209ENST00000503346 CDK8P49336 464 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 CRHR2Q13324 411 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 GPAT2Q6NUI2 795 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 NAPBQ9H115 298 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 CABP5Q9NP86 173 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 DIAPH3Q9NSV4 1193 aa21.78■■□□□ 1.08
PDLIM7-209ENST00000503346 MINDY4BA8MYZ0 360 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 GPR25O00155 361 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 GUCY1A2P33402 732 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 TAF1CQ15572 869 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 ALX1Q15699 326 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 SH3D19Q5HYK7 790 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 COL13A1Q5TAT6 717 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 VPS53Q5VIR6 699 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 CCDC17Q96LX7 622 aa21.77■■□□□ 1.08
PDLIM7-209ENST00000503346 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.07
PDLIM7-209ENST00000503346 PHIPQ8WWQ0 1821 aa21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 PDHXO00330 501 aa21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 MFAP1P55081 439 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 BACE1P56817 501 aa21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 PROCA1Q8NCQ7 364 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 ZFYVE28Q9HCC9 887 aa21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 SLC45A1Q9Y2W3 748 aa21.76■■□□□ 1.07
PDLIM7-209ENST00000503346 BAZ2AQ9UIF9 1905 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 HSPD1P10809 573 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 MTMR2Q13614 643 aa21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 RAB3GAP1Q15042 981 aa21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 CWC27Q6UX04 472 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 GADL1Q6ZQY3 521 aa21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 TMEM179Q6ZVK1 233 aa21.75■■□□□ 1.07
PDLIM7-209ENST00000503346 ATAD5Q96QE3 1844 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 MPHOSPH10O00566 681 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 AKR1B1P15121 316 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 HMGCS2P54868 508 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 SEPT2Q15019 361 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 ZNF296Q8WUU4 475 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
PDLIM7-209ENST00000503346 PPARAQ07869 468 aa21.73■■□□□ 1.07
PDLIM7-209ENST00000503346 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
PDLIM7-209ENST00000503346 ZMYM6O95789 1325 aa21.73■■□□□ 1.07
PDLIM7-209ENST00000503346 TLR2O60603 784 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 FKTNO75072 461 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 FGAP02671 866 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 PARK7Q99497 189 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 MKNK2Q9HBH9 465 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 PPP4R2Q9NY27 417 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 ANAPC4Q9UJX5 808 aa21.72■■□□□ 1.07
PDLIM7-209ENST00000503346 SLC3A2P08195 630 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-209ENST00000503346 RASA1P20936 1047 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms