RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM170BA6NMN3 283 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 ZNF165P49910 485 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 CYP27A1Q02318 531 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 ZDHHC13Q8IUH4 622 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 METTL22Q9BUU2 404 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-203ENST00000503274 OSBPL1AQ9BXW6 950 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 PCDHB14Q9Y5E9 798 aa9.41□□□□□ -0.9
NIPBL-203ENST00000503274 ATE1O95260 518 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-203ENST00000503274 FAM87AP0C7U9 286 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 GK5Q6ZS86 529 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 NPM2Q86SE8 214 aaKnown RBP9.4□□□□□ -0.9
NIPBL-203ENST00000503274 MFSD2AQ8NA29 543 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 SPATA32Q96LK8 384 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 EHMT1Q9H9B1 1298 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 PRDM10Q9NQV6 1147 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 INPP5FQ9Y2H2 1132 aa9.4□□□□□ -0.9
NIPBL-203ENST00000503274 GJA8P48165 433 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 CLCQ05315 142 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 MLECQ14165 292 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 CPSF6Q16630 551 aaKnown RBP eCLIP9.39□□□□□ -0.91
NIPBL-203ENST00000503274 CYP27C1Q4G0S4 372 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 PRAMEF13Q5VWM6 474 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 ZNF765Q7L2R6 523 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 TOP6BLQ8N6T0 577 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 RASGRP4Q8TDF6 673 aa9.39□□□□□ -0.91
NIPBL-203ENST00000503274 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
NIPBL-203ENST00000503274 LEFTY1O75610 366 aa9.38□□□□□ -0.91
NIPBL-203ENST00000503274 TNNI2P48788 182 aa9.38□□□□□ -0.91
NIPBL-203ENST00000503274 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
NIPBL-203ENST00000503274 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
NIPBL-203ENST00000503274 PRR19A6NJB7 356 aa9.37□□□□□ -0.91
NIPBL-203ENST00000503274 UPK3BL1B0FP48 263 aa9.37□□□□□ -0.91
NIPBL-203ENST00000503274 UPK3BL2E5RIL1 263 aa9.37□□□□□ -0.91
NIPBL-203ENST00000503274 COL9A2Q14055 689 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-203ENST00000503274 DPH2Q9BQC3 489 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-203ENST00000503274 KLHL3Q9UH77 587 aa9.37□□□□□ -0.91
NIPBL-203ENST00000503274 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
NIPBL-203ENST00000503274 SLITRK5O94991 958 aa9.36□□□□□ -0.91
NIPBL-203ENST00000503274 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
NIPBL-203ENST00000503274 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
NIPBL-203ENST00000503274 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
NIPBL-203ENST00000503274 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
NIPBL-203ENST00000503274 CHURC1-FNTBB4DL54 471 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 DNAJA2O60884 412 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 TGFB1P01137 390 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 SLFN12Q8IYM2 578 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 MIPEPQ99797 713 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 EFR3BQ9Y2G0 817 aa9.35□□□□□ -0.91
NIPBL-203ENST00000503274 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
NIPBL-203ENST00000503274 SOX9P48436 509 aa9.34□□□□□ -0.91
NIPBL-203ENST00000503274 GNL2Q13823 731 aaKnown RBP9.34□□□□□ -0.91
NIPBL-203ENST00000503274 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
NIPBL-203ENST00000503274 LETMD1Q6P1Q0 360 aa9.34□□□□□ -0.91
NIPBL-203ENST00000503274 FERD3LQ96RJ6 166 aa9.34□□□□□ -0.91
NIPBL-203ENST00000503274 GMIPQ9P107 970 aa9.34□□□□□ -0.91
NIPBL-203ENST00000503274 CYP26A1O43174 497 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 EOMESO95936 686 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 IMPDH2P12268 514 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 SEC16BQ96JE7 1060 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 ZNRF3Q9ULT6 936 aa9.33□□□□□ -0.92
NIPBL-203ENST00000503274 FOSL1P15407 271 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 FAM214BQ7L5A3 538 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 VPS37DQ86XT2 251 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 CYB5D2Q8WUJ1 264 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 LRRC4CQ9HCJ2 640 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 PPT2Q9UMR5 302 aa9.32□□□□□ -0.92
NIPBL-203ENST00000503274 GRIK1P39086 918 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 NASPP49321 788 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-203ENST00000503274 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 FBXW10Q5XX13 1052 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 OVOS1Q6IE37 1185 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 TMEM40Q8WWA1 233 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 CCDC74BQ96LY2 380 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 HEXIM2Q96MH2 286 aaKnown RBP9.31□□□□□ -0.92
NIPBL-203ENST00000503274 TINF2Q9BSI4 451 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 ANTXR1Q9H6X2 564 aa9.31□□□□□ -0.92
NIPBL-203ENST00000503274 TPX2Q9ULW0 747 aaKnown RBP9.31□□□□□ -0.92
NIPBL-203ENST00000503274 MEIS3P2A8K0S8 358 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 COBLO75128 1261 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-203ENST00000503274 CDCP2Q5VXM1 449 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 ZNF746Q6NUN9 644 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-203ENST00000503274 INTS5Q6P9B9 1019 aaKnown RBP9.3□□□□□ -0.92
NIPBL-203ENST00000503274 CDH24Q86UP0 819 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 ATG4CQ96DT6 458 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 CNNM2Q9H8M5 875 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 PRDM5Q9NQX1 630 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-203ENST00000503274 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
NIPBL-203ENST00000503274 IGF2BP3O00425 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
NIPBL-203ENST00000503274 RAG1P15918 1043 aa9.29□□□□□ -0.92
NIPBL-203ENST00000503274 HOXA10P31260 410 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-203ENST00000503274 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms