RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 A0A0D9SFI3 127 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 USP17L21D6R901 530 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 PRKAB2O43741 272 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 AOC2O75106 756 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 SHMT1P34896 483 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 GJA5P36382 358 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 IFNL3Q8IZI9 196 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 SLC45A1Q9Y2W3 748 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 AFG3L2Q9Y4W6 797 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 PHIPQ8WWQ0 1821 aa12.83□□□□□ -0.36
UBE2D3-212ENST00000502563 IRF6O14896 467 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 FOXP2O15409 715 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 CETPP11597 493 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 SH3D19Q5HYK7 790 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 RUFY2Q8WXA3 655 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-212ENST00000502563 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 FGRP09769 529 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 HSPD1P10809 573 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 CERKLQ49MI3 558 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 FASTKD5Q7L8L6 764 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 NAPBQ9H115 298 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 ZBTB21Q9ULJ3 1066 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 PLIN4Q96Q06 1357 aa12.81□□□□□ -0.36
UBE2D3-212ENST00000502563 PTPRFP10586 1907 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 SLC3A2P08195 630 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 HSPA1BP0DMV9 641 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 CHMLP26374 656 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 TDO2P48775 406 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
UBE2D3-212ENST00000502563 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 CDK8P49336 464 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 C12orf42Q96LP6 360 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 CABP5Q9NP86 173 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
UBE2D3-212ENST00000502563 SGSM2O43147 1006 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 FGAP02671 866 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 APPP05067 770 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 BACE1P56817 501 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 PDE4BQ07343 736 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 PPARAQ07869 468 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 GRM1Q13255 1194 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 MOGSQ13724 837 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 PTPN18Q99952 460 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 MYH8P13535 1937 aa12.78□□□□□ -0.36
UBE2D3-212ENST00000502563 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 USP17L10C9JJH3 530 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 ORC4O43929 436 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 GH2P01242 217 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 SLURP2P0DP57 97 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 CYP2D6P10635 497 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 USP14P54578 494 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 CCL15Q16663 113 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 KIAA1683Q9H0B3 1180 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 KANSL2Q9H9L4 492 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms